RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 COMMD5Q9GZQ3 224 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 OR2D2Q9H210 308 aa3.25□□□□□ -1.89
SKP1-213ENST00000524288 BOKQ9UMX3 212 aaPredicted RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 MRPS16Q9Y3D3 137 aaKnown RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 RANBP2P49792 3224 aaKnown RBP3.25□□□□□ -1.89
SKP1-213ENST00000524288 IGHV3OR16-8A0A075B7F1 116 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 IGHV2-26A0A0B4J1V2 119 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 IGHV1-69-2A0A0G2JMI3 117 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 SMIM27A0A1W2PRY6 76 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 C21orf140B9A014 251 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 C15orf65H3BRN8 121 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 ISLRO14498 428 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 HAND1O96004 215 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 HBZP02008 142 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 CBLN1P23435 193 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 G6PCP35575 357 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 MPV17P39210 176 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 KLF3P57682 345 aaPredicted RBP3.24□□□□□ -1.89
SKP1-213ENST00000524288 PMCHL1Q16048 86 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 HLA-DRB5Q30154 266 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 ZNF705AQ6ZN79 300 aaPredicted RBP3.24□□□□□ -1.89
SKP1-213ENST00000524288 TCF23Q7RTU1 214 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 LRP11Q86VZ4 500 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 NIT1Q86X76 327 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.24□□□□□ -1.89
SKP1-213ENST00000524288 GALMQ96C23 342 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 IGF2BP2-AS1Q96M15 143 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 ANAPC13Q9BS18 74 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 FBXL15Q9H469 300 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 ASCL3Q9NQ33 180 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 TMEM167BQ9NRX6 74 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 JPT1Q9UK76 154 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 TRAPPC2LQ9UL33 140 aa3.24□□□□□ -1.89
SKP1-213ENST00000524288 TBL2Q9Y4P3 447 aaKnown RBP3.24□□□□□ -1.89
SKP1-213ENST00000524288 GPR179Q6PRD1 2367 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 LAMA2P24043 3122 aaKnown RBP3.23□□□□□ -1.89
SKP1-213ENST00000524288 TRAV38-1A0A0B4J264 116 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 A0A1W2PRE2 83 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 GRIFINA4D1Z8 144 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 IZUMO1RA6ND01 250 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 HMGB3O15347 200 aaKnown RBP3.23□□□□□ -1.89
SKP1-213ENST00000524288 COX7A2P2O60397 106 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 HYPMO75409 117 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 IGHV1-46P01743 117 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 PPBPP02775 128 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 LGALS7P47929 136 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 REG1BP48304 166 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 UBE2G2P60604 165 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 RHOGP84095 191 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 ZNF90Q03938 601 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 TBC1D28Q2M2D7 210 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 TDRG1Q3Y452 100 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 SPATA45Q537H7 98 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 SAPCD1Q5SSQ6 148 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 FAM162BQ5T6X4 162 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 SIGLECL1Q8N7X8 197 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 ST6GALNAC3Q8NDV1 305 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 KLF14Q8TD94 323 aaPredicted RBP3.23□□□□□ -1.89
SKP1-213ENST00000524288 CT55Q8WUE5 264 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 SMIM12Q96EX1 92 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 MRPL32Q9BYC8 188 aaKnown RBP3.23□□□□□ -1.89
SKP1-213ENST00000524288 NPVFQ9HCQ7 196 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 TMEM14BQ9NUH8 114 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 LAMTOR2Q9Y2Q5 125 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 RBM7Q9Y580 266 aaKnown RBP3.23□□□□□ -1.89
SKP1-213ENST00000524288 DNAJC13O75165 2243 aa3.23□□□□□ -1.89
SKP1-213ENST00000524288 DSCAMO60469 2012 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 IGLC7A0M8Q6 106 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 F2Z2F3 143 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 UPK2O00526 184 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CRXO43186 299 aaPredicted RBP3.22□□□□□ -1.89
SKP1-213ENST00000524288 CA2P00918 260 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 HLA-DRB1P01911 266 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 C3orf79P0CE67 100 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CGB3P0DN86 165 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CGB7P0DN87 165 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 DEFA4P12838 97 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 TSPOP30536 169 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 ZNF83P51522 516 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 EDDM3BP56851 147 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CD164Q04900 197 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 RAB31Q13636 194 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CLEC12BQ2HXU8 276 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 SMIM21Q3B7S5 101 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CENPWQ5EE01 88 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 MIC13Q5XKP0 118 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 ATP5L2Q7Z4Y8 100 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 BAGE3Q86Y29 109 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 BAGE2Q86Y30 109 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 MUC15Q8N387 334 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 GATD1Q8NB37 220 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 OR8B3Q8NGG8 313 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 C18orf32Q8TCD1 76 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 TSKUQ8WUA8 353 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 ZNF714Q96N38 554 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 OR8B2Q96RD0 313 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 SOX21Q9Y651 276 aaPredicted RBP3.22□□□□□ -1.89
SKP1-213ENST00000524288 PRR14LQ5THK1 2151 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms