RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 MIC13Q5XKP0 118 aa11.04□□□□□ -0.64
PVT1-220ENST00000524165 CHCHD7Q9BUK0 85 aa11.04□□□□□ -0.64
PVT1-220ENST00000524165 GPN1Q9HCN4 374 aaPredicted RBP11.04□□□□□ -0.64
PVT1-220ENST00000524165 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
PVT1-220ENST00000524165 PHOX2AO14813 284 aa11.03□□□□□ -0.64
PVT1-220ENST00000524165 TSC22D2O75157 780 aa11.03□□□□□ -0.64
PVT1-220ENST00000524165 ARL16Q0P5N6 197 aa11.03□□□□□ -0.64
PVT1-220ENST00000524165 REG3GQ6UW15 175 aa11.03□□□□□ -0.64
PVT1-220ENST00000524165 NRARPQ7Z6K4 114 aa11.03□□□□□ -0.64
PVT1-220ENST00000524165 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
PVT1-220ENST00000524165 A0A087WYN8 130 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 GAGE12JA6NER3 117 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 SFT2D2O95562 160 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 TYMSP04818 313 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 TAS2R30P59541 319 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 GAGE1Q13065 139 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 GAGE4Q13068 117 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 GAGE5Q13069 117 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 GAGE13Q4V321 117 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 DYNC2LI1Q8TCX1 351 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 C7orf33Q8WU49 177 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 MIXL1Q9H2W2 232 aa11.02□□□□□ -0.65
PVT1-220ENST00000524165 A0A087WX48 190 aa11.01□□□□□ -0.65
PVT1-220ENST00000524165 DIRC3C9JPN6 131 aa11.01□□□□□ -0.65
PVT1-220ENST00000524165 FUNDC2Q9BWH2 189 aa11.01□□□□□ -0.65
PVT1-220ENST00000524165 SDF2L1Q9HCN8 221 aa11.01□□□□□ -0.65
PVT1-220ENST00000524165 DPH3Q96FX2 82 aa11□□□□□ -0.65
PVT1-220ENST00000524165 RPL29P47914 159 aaKnown RBP10.99□□□□□ -0.65
PVT1-220ENST00000524165 CAV2P51636 162 aa10.99□□□□□ -0.65
PVT1-220ENST00000524165 PPP1R1AQ13522 171 aa10.99□□□□□ -0.65
PVT1-220ENST00000524165 KCNS1Q96KK3 526 aa10.99□□□□□ -0.65
PVT1-220ENST00000524165 VCX3AQ9NNX9 186 aa10.99□□□□□ -0.65
PVT1-220ENST00000524165 RABL2AQ9UBK7 228 aaPredicted RBP10.99□□□□□ -0.65
PVT1-220ENST00000524165 PGPA6NDG6 321 aa10.98□□□□□ -0.65
PVT1-220ENST00000524165 NBEAP1P0C6P0 100 aa10.98□□□□□ -0.65
PVT1-220ENST00000524165 CSN1S1P47710 185 aa10.98□□□□□ -0.65
PVT1-220ENST00000524165 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
PVT1-220ENST00000524165 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
PVT1-220ENST00000524165 SPINK6Q6UWN8 80 aa10.98□□□□□ -0.65
PVT1-220ENST00000524165 PLAC8Q9NZF1 115 aa10.98□□□□□ -0.65
PVT1-220ENST00000524165 TRAV21A0A0B4J279 112 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 RGS5O15539 181 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 HLA-DQA1P01909 254 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 FGF8P55075 233 aaPredicted RBP10.97□□□□□ -0.65
PVT1-220ENST00000524165 IL18Q14116 193 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 ENHOQ6UWT2 76 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 PTH2Q96A98 100 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 SLC25A2Q9BXI2 301 aa10.97□□□□□ -0.65
PVT1-220ENST00000524165 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.65
PVT1-220ENST00000524165 ZFP2Q6ZN57 461 aa10.96□□□□□ -0.65
PVT1-220ENST00000524165 ASB13Q8WXK3 278 aa10.96□□□□□ -0.65
PVT1-220ENST00000524165 C20orf85Q9H1P6 137 aa10.96□□□□□ -0.65
PVT1-220ENST00000524165 WDR83OSQ9Y284 106 aa10.96□□□□□ -0.65
PVT1-220ENST00000524165 CRPP02741 224 aa10.95□□□□□ -0.66
PVT1-220ENST00000524165 CNBPP62633 177 aaKnown RBP10.95□□□□□ -0.66
PVT1-220ENST00000524165 Q9UF83 564 aa10.95□□□□□ -0.66
PVT1-220ENST00000524165 FAUP35544 74 aaKnown RBP10.94□□□□□ -0.66
PVT1-220ENST00000524165 ZNF506Q5JVG8 444 aa10.94□□□□□ -0.66
PVT1-220ENST00000524165 CHAC2Q8WUX2 184 aa10.94□□□□□ -0.66
PVT1-220ENST00000524165 FAM167A-AS1Q96KT0 104 aa10.94□□□□□ -0.66
PVT1-220ENST00000524165 LINC00479Q96M42 142 aa10.94□□□□□ -0.66
PVT1-220ENST00000524165 SLC25A21Q9BQT8 299 aaPredicted RBP10.94□□□□□ -0.66
PVT1-220ENST00000524165 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
PVT1-220ENST00000524165 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 C7orf66A4D0T2 115 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 CTDSP2O14595 271 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 SCGB1D2O95969 90 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 CHTF8P0CG12 524 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 CLRN3Q8NCR9 226 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 PHYHIPLQ96FC7 376 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 PARLQ9H300 379 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 UQCC1Q9NVA1 299 aa10.93□□□□□ -0.66
PVT1-220ENST00000524165 A0A087WXM4 84 aa10.92□□□□□ -0.66
PVT1-220ENST00000524165 TAAR5O14804 337 aa10.92□□□□□ -0.66
PVT1-220ENST00000524165 DIRAS2Q96HU8 199 aa10.92□□□□□ -0.66
PVT1-220ENST00000524165 MIAQ16674 131 aa10.91□□□□□ -0.66
PVT1-220ENST00000524165 OR2T35Q8NGX2 323 aa10.91□□□□□ -0.66
PVT1-220ENST00000524165 MCFD2Q8NI22 146 aa10.91□□□□□ -0.66
PVT1-220ENST00000524165 FXYD5Q96DB9 178 aa10.91□□□□□ -0.66
PVT1-220ENST00000524165 RSL24D1Q9UHA3 163 aaKnown RBP10.91□□□□□ -0.66
PVT1-220ENST00000524165 VAX2Q9UIW0 290 aa10.91□□□□□ -0.66
PVT1-220ENST00000524165 SMIM18P0DKX4 95 aa10.9□□□□□ -0.66
PVT1-220ENST00000524165 CTF1Q16619 201 aa10.9□□□□□ -0.66
PVT1-220ENST00000524165 GTSF1Q8WW33 167 aa10.9□□□□□ -0.66
PVT1-220ENST00000524165 C9orf170A2RU37 121 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 A8MWV9 139 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 RANP62826 216 aaKnown RBP10.89□□□□□ -0.67
PVT1-220ENST00000524165 BAXQ07812 192 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 MIR17HGQ75NE6 70 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
PVT1-220ENST00000524165 C15orf54Q8N8G6 183 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 OR10G7Q8NGN6 311 aa10.89□□□□□ -0.67
PVT1-220ENST00000524165 F6UZH7 168 aa10.88□□□□□ -0.67
PVT1-220ENST00000524165 SRSF9Q13242 221 aaKnown RBP eCLIP10.88□□□□□ -0.674e-6■■■■□ 20.8
PVT1-220ENST00000524165 IAH1Q2TAA2 248 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms