RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TRIM63Q969Q1 353 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 PHYHIPLQ96FC7 376 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 C20orf85Q9H1P6 137 aa7.57□□□□□ -1.2
SDCBP-211ENST00000523441 F6UZH7 168 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 TYMSP04818 313 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 NBEAP1P0C6P0 100 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 CSN1S1P47710 185 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 TAS2R30P59541 319 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 RANP62826 216 aaKnown RBP7.56□□□□□ -1.2
SDCBP-211ENST00000523441 ASAH1Q13510 395 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 DYNC2LI1Q8TCX1 351 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 HYLS1Q96M11 299 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 WDR83OSQ9Y284 106 aa7.56□□□□□ -1.2
SDCBP-211ENST00000523441 SMIM18P0DKX4 95 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 RPL29P47914 159 aaKnown RBP7.55□□□□□ -1.2
SDCBP-211ENST00000523441 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 DPPA3Q6W0C5 159 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 UBE2WQ96B02 151 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 RMI2Q96E14 147 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 OR51M1Q9H341 326 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 DPH3P1Q9H4G8 78 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 KLK12Q9UKR0 248 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 URGCP-MRPS24S4R325 110 aa7.55□□□□□ -1.2
SDCBP-211ENST00000523441 TNXBP22105 4242 aa7.54□□□□□ -1.2
SDCBP-211ENST00000523441 RNF222A6NCQ9 220 aa7.54□□□□□ -1.2
SDCBP-211ENST00000523441 Q6AWC8 147 aa7.54□□□□□ -1.2
SDCBP-211ENST00000523441 PAXXQ9BUH6 204 aa7.54□□□□□ -1.2
SDCBP-211ENST00000523441 SDF2L1Q9HCN8 221 aa7.54□□□□□ -1.2
SDCBP-211ENST00000523441 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 OR7C2O60412 319 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
SDCBP-211ENST00000523441 S100A10P60903 97 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 OR2T35Q8NGX2 323 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 FAM167A-AS1Q96KT0 104 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 ATP5SQ99766 215 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
SDCBP-211ENST00000523441 TRAV8-1A0A0A6YYK1 113 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 INPP1P49441 399 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-211ENST00000523441 THAP6Q8TBB0 222 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 ASB13Q8WXK3 278 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 FXYD5Q96DB9 178 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 BCL7BQ9BQE9 202 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 Q9UF83 564 aa7.52□□□□□ -1.21
SDCBP-211ENST00000523441 TRAV21A0A0B4J279 112 aa7.51□□□□□ -1.21
SDCBP-211ENST00000523441 IGSF23A1L1A6 192 aa7.51□□□□□ -1.21
SDCBP-211ENST00000523441 SGK494Q96LW2 274 aa7.51□□□□□ -1.21
SDCBP-211ENST00000523441 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
SDCBP-211ENST00000523441 NMES1Q9C002 83 aa7.51□□□□□ -1.21
SDCBP-211ENST00000523441 SLIRPQ9GZT3 109 aaKnown RBP7.51□□□□□ -1.21
SDCBP-211ENST00000523441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.51□□□□□ -1.21
SDCBP-211ENST00000523441 TRBV7-9A0A0J9YWB2 115 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 PGPEP1LA6NFU8 196 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 DIRC3C9JPN6 131 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 PANO1I0J062 215 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 NDUFB6O95139 128 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 GAS8-AS1O95177 125 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 HLA-DQA1P01909 254 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 UBE2L3P68036 154 aaKnown RBP7.5□□□□□ -1.21
SDCBP-211ENST00000523441 TMEM75Q8N9X5 138 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 DPH3Q96FX2 82 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 C2orf50Q96LR7 162 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 NPCDR1Q9BY65 106 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 V9GYH0 126 aa7.5□□□□□ -1.21
SDCBP-211ENST00000523441 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 MGST1P10620 155 aaKnown RBP7.49□□□□□ -1.21
SDCBP-211ENST00000523441 PVALBP20472 110 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-211ENST00000523441 S100A11P31949 105 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 SULT1A1P50225 295 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 ZNF506Q5JVG8 444 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 SPANXN2Q5MJ10 180 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 Q6ZRU5 148 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 GOLT1AQ6ZVE7 132 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 STX12Q86Y82 276 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 KCNS1Q96KK3 526 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 TREM1Q9NP99 234 aa7.49□□□□□ -1.21
SDCBP-211ENST00000523441 A0A087WX48 190 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 NOL3O60936 208 aaKnown RBP7.48□□□□□ -1.21
SDCBP-211ENST00000523441 GNG5P63218 68 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 HBG1P69891 147 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 HBG2P69892 147 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 LGALSLQ3ZCW2 172 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-211ENST00000523441 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 KCNIP4Q6PIL6 250 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 NIT1Q86X76 327 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 TMEM252Q8N6L7 170 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 C14orf178Q8N769 122 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-211ENST00000523441 CYB561D1Q8N8Q1 229 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 CMTM2Q8TAZ6 248 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 TVP23CQ96ET8 276 aa7.48□□□□□ -1.21
SDCBP-211ENST00000523441 PGPA6NDG6 321 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 USP17L23D6RBM5 183 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 FFAR4Q5NUL3 377 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 TRIQKQ629K1 86 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 MITD1Q8WV92 249 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms