RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 OR10J3Q5JRS4 329 aa15.07■□□□□ 0
PVT1-218ENST00000523328 BOLA1Q9Y3E2 137 aa15.07■□□□□ 0
PVT1-218ENST00000523328 TCRBP04435 133 aa15.06■□□□□ 0
PVT1-218ENST00000523328 NHLH2Q02577 135 aa15.06■□□□□ 0
PVT1-218ENST00000523328 PFN1P07737 140 aaKnown RBP15.05■□□□□ -0
PVT1-218ENST00000523328 LAGE3Q14657 143 aa15.05■□□□□ -0
PVT1-218ENST00000523328 SERTAD4-AS1Q5TG53 156 aa15.05■□□□□ -0
PVT1-218ENST00000523328 SLC25A29Q8N8R3 303 aa15.05■□□□□ -0
PVT1-218ENST00000523328 OR5C1Q8NGR4 320 aa15.05■□□□□ -0
PVT1-218ENST00000523328 TMED6Q8WW62 240 aa15.05■□□□□ -0
PVT1-218ENST00000523328 LYRM1O43325 122 aa15.04■□□□□ -0
PVT1-218ENST00000523328 OR7C2O60412 319 aa15.04■□□□□ -0
PVT1-218ENST00000523328 TYMSP04818 313 aa15.04■□□□□ -0
PVT1-218ENST00000523328 LELP1Q5T871 98 aa15.04■□□□□ -0
PVT1-218ENST00000523328 NUDT15Q9NV35 164 aa15.04■□□□□ -0
PVT1-218ENST00000523328 FBLL1A6NHQ2 334 aaKnown RBP15.03■□□□□ -0
PVT1-218ENST00000523328 FAT3Q8TDW7 4589 aa15.02■□□□□ -0
PVT1-218ENST00000523328 UBE2L3P68036 154 aaKnown RBP15.02■□□□□ -0
PVT1-218ENST00000523328 TM2D2Q9BX73 214 aa15.02■□□□□ -0
PVT1-218ENST00000523328 WDR61Q9GZS3 305 aaKnown RBP15.02■□□□□ -0
PVT1-218ENST00000523328 KRTAP10-4P60372 401 aaPredicted RBP15.01□□□□□ -0.01
PVT1-218ENST00000523328 Q8N3U1 123 aa15.01□□□□□ -0.01
PVT1-218ENST00000523328 KCNIP2Q9NS61 270 aa15.01□□□□□ -0.01
PVT1-218ENST00000523328 TRAV21A0A0B4J279 112 aa15□□□□□ -0.01
PVT1-218ENST00000523328 TRBV6-4A0A1B0GX49 114 aa15□□□□□ -0.01
PVT1-218ENST00000523328 RHOHQ15669 191 aa15□□□□□ -0.01
PVT1-218ENST00000523328 SYT8Q8NBV8 401 aa15□□□□□ -0.01
PVT1-218ENST00000523328 PRADC1Q9BSG0 188 aa15□□□□□ -0.01
PVT1-218ENST00000523328 LECT2O14960 151 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 CFAP126Q5VTH2 177 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 DPPA3Q6W0C5 159 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 SCXQ7RTU7 201 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 TVP23CQ96ET8 276 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 HYLS1Q96M11 299 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 GTSF1LQ9H1H1 148 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 SDF2L1Q9HCN8 221 aa14.99□□□□□ -0.01
PVT1-218ENST00000523328 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.98□□□□□ -0.01
PVT1-218ENST00000523328 F6UZH7 168 aa14.98□□□□□ -0.01
PVT1-218ENST00000523328 RS1O15537 224 aa14.98□□□□□ -0.01
PVT1-218ENST00000523328 CIDEAO60543 219 aa14.97□□□□□ -0.01
PVT1-218ENST00000523328 ZNF876PQ49A33 203 aa14.97□□□□□ -0.01
PVT1-218ENST00000523328 LINC01620Q4KN68 170 aa14.97□□□□□ -0.01
PVT1-218ENST00000523328 ATP6V0E2Q8NHE4 81 aa14.97□□□□□ -0.01
PVT1-218ENST00000523328 KCNS1Q96KK3 526 aa14.97□□□□□ -0.01
PVT1-218ENST00000523328 IGHV3-73A0A0B4J1V6 119 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 C17orf112F2Z3M2 114 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 H2AFB2P0C5Z0 115 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 KHDC3LQ587J8 217 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 ASB13Q8WXK3 278 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 ATP5SQ99766 215 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 OTORQ9NRC9 128 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 OR5AC2Q9NZP5 309 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 RPH3ALQ9UNE2 315 aa14.96□□□□□ -0.01
PVT1-218ENST00000523328 TRAV8-1A0A0A6YYK1 113 aa14.95□□□□□ -0.02
PVT1-218ENST00000523328 PGPA6NDG6 321 aa14.95□□□□□ -0.02
PVT1-218ENST00000523328 GOLT1AQ6ZVE7 132 aa14.95□□□□□ -0.02
PVT1-218ENST00000523328 TREM1Q9NP99 234 aa14.95□□□□□ -0.02
PVT1-218ENST00000523328 TRAV8-3A0A0A6YYJ7 113 aa14.94□□□□□ -0.02
PVT1-218ENST00000523328 OXTP01178 125 aa14.94□□□□□ -0.02
PVT1-218ENST00000523328 CMTM2Q8TAZ6 248 aa14.94□□□□□ -0.02
PVT1-218ENST00000523328 H0YIZ8 118 aa14.93□□□□□ -0.02
PVT1-218ENST00000523328 EIF3GO75821 320 aaKnown RBP eCLIP14.93□□□□□ -0.02
PVT1-218ENST00000523328 TAS2R45P59539 299 aa14.93□□□□□ -0.02
PVT1-218ENST00000523328 FFAR4Q5NUL3 377 aa14.93□□□□□ -0.02
PVT1-218ENST00000523328 DAZ4Q86SG3 579 aaKnown RBP14.93□□□□□ -0.02
PVT1-218ENST00000523328 NMES1Q9C002 83 aa14.93□□□□□ -0.02
PVT1-218ENST00000523328 DAZ3Q9NR90 486 aaKnown RBP14.93□□□□□ -0.02
PVT1-218ENST00000523328 C11orf21Q9P2W6 132 aa14.93□□□□□ -0.02
PVT1-218ENST00000523328 MGST1P10620 155 aaKnown RBP14.92□□□□□ -0.02
PVT1-218ENST00000523328 ARL6IP6Q8N6S5 226 aa14.92□□□□□ -0.02
PVT1-218ENST00000523328 BAALCQ8WXS3 180 aa14.92□□□□□ -0.02
PVT1-218ENST00000523328 C9orf85Q96MD7 179 aa14.92□□□□□ -0.02
PVT1-218ENST00000523328 CHAC1Q9BUX1 264 aa14.92□□□□□ -0.02
PVT1-218ENST00000523328 MBD2Q9UBB5 411 aa14.92□□□□□ -0.02
PVT1-218ENST00000523328 SIX6O95475 246 aa14.91□□□□□ -0.02
PVT1-218ENST00000523328 FAM74A1Q5RGS3 127 aa14.91□□□□□ -0.02
PVT1-218ENST00000523328 PGPEP1LA6NFU8 196 aa14.9□□□□□ -0.02
PVT1-218ENST00000523328 LINC00694P0DN24 101 aa14.9□□□□□ -0.02
PVT1-218ENST00000523328 LRRC37A5PQ49AS3 106 aa14.9□□□□□ -0.02
PVT1-218ENST00000523328 ZNF506Q5JVG8 444 aa14.9□□□□□ -0.02
PVT1-218ENST00000523328 PLA2G2DQ9UNK4 145 aa14.9□□□□□ -0.02
PVT1-218ENST00000523328 ZNF80P51504 273 aaPredicted RBP14.89□□□□□ -0.03
PVT1-218ENST00000523328 GNG5P63218 68 aa14.89□□□□□ -0.03
PVT1-218ENST00000523328 ASAH1Q13510 395 aa14.89□□□□□ -0.03
PVT1-218ENST00000523328 TOR2AQ5JU69 321 aa14.89□□□□□ -0.03
PVT1-218ENST00000523328 CIRBP-AS1Q8TBR5 109 aa14.89□□□□□ -0.03
PVT1-218ENST00000523328 PTH2Q96A98 100 aa14.89□□□□□ -0.03
PVT1-218ENST00000523328 SGK494Q96LW2 274 aa14.88□□□□□ -0.03
PVT1-218ENST00000523328 COX11Q9Y6N1 276 aa14.88□□□□□ -0.03
PVT1-218ENST00000523328 PKHD1L1Q86WI1 4243 aa14.87□□□□□ -0.03
PVT1-218ENST00000523328 RBFOX3A6NFN3 312 aa14.87□□□□□ -0.03
PVT1-218ENST00000523328 GGTLC3B5MD39 225 aa14.87□□□□□ -0.03
PVT1-218ENST00000523328 RNASE3P12724 160 aaKnown RBP14.87□□□□□ -0.03
PVT1-218ENST00000523328 TMEM75Q8N9X5 138 aa14.87□□□□□ -0.03
PVT1-218ENST00000523328 FAM240BA0A1B0GVZ2 78 aa14.86□□□□□ -0.03
PVT1-218ENST00000523328 RNF222A6NCQ9 220 aa14.86□□□□□ -0.03
PVT1-218ENST00000523328 GAGE12JA6NER3 117 aa14.86□□□□□ -0.03
PVT1-218ENST00000523328 GAGE1Q13065 139 aa14.86□□□□□ -0.03
PVT1-218ENST00000523328 GAGE4Q13068 117 aa14.86□□□□□ -0.03
PVT1-218ENST00000523328 GAGE5Q13069 117 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms