RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 MRPL16Q9NX20 251 aaKnown RBP5.48□□□□□ -1.53
PVT1-213ENST00000522414 OR5AC2Q9NZP5 309 aa5.48□□□□□ -1.53
PVT1-213ENST00000522414 PRELID1Q9Y255 219 aa5.48□□□□□ -1.53
PVT1-213ENST00000522414 IGHV1OR15-1A0A075B7D0 117 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 FXYD6-FXYD2A0A087WZ82 144 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 NMBP08949 121 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 CRISP2P16562 243 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 LINC00315P59091 139 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 RANP62826 216 aaKnown RBP5.47□□□□□ -1.53
PVT1-213ENST00000522414 SUMO1P63165 101 aaKnown RBP5.47□□□□□ -1.53
PVT1-213ENST00000522414 TTC32Q5I0X7 151 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 MUC21Q5SSG8 566 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 LYPD5Q6UWN5 251 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 ZNF680Q8NEM1 530 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 Q8TAT8 98 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 PPP1R1CQ8WVI7 109 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 ASB13Q8WXK3 278 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 FXYD5Q96DB9 178 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 HYLS1Q96M11 299 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 AAMDCQ9H7C9 122 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 MDFICQ9P1T7 246 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 ZNF492Q9P255 531 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 HHLA3Q9XRX5 114 aa5.47□□□□□ -1.53
PVT1-213ENST00000522414 TRBV7-9A0A0J9YWB2 115 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 A0A1W2PPQ1 181 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 E5RGE8 158 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 SIVA1O15304 175 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 NXPH4O95158 308 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 MPC2O95563 127 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 ZNF138P52744 262 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 CRYBA4P53673 196 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 TCL1AP56279 114 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 CYCSP99999 105 aaKnown RBP5.46□□□□□ -1.54
PVT1-213ENST00000522414 TMEM78Q5T7P6 136 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 Q6ZRN7 208 aaPredicted RBP5.46□□□□□ -1.54
PVT1-213ENST00000522414 C9orf62Q8N4C0 152 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 PHYHIPLQ96FC7 376 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 PAXXQ9BUH6 204 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 MBD2Q9UBB5 411 aa5.46□□□□□ -1.54
PVT1-213ENST00000522414 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
PVT1-213ENST00000522414 ARPC5O15511 151 aa5.45□□□□□ -1.54
PVT1-213ENST00000522414 SFTA3P0C7M3 94 aa5.45□□□□□ -1.54
PVT1-213ENST00000522414 LGALSLQ3ZCW2 172 aaPredicted RBP5.45□□□□□ -1.54
PVT1-213ENST00000522414 IBA57Q5T440 356 aaKnown RBP5.45□□□□□ -1.54
PVT1-213ENST00000522414 ZNF479Q96JC4 524 aa5.45□□□□□ -1.54
PVT1-213ENST00000522414 WDR61Q9GZS3 305 aaKnown RBP5.45□□□□□ -1.54
PVT1-213ENST00000522414 SLC25A31Q9H0C2 315 aa5.45□□□□□ -1.54
PVT1-213ENST00000522414 PRO0255Q9UI72 69 aa5.45□□□□□ -1.54
PVT1-213ENST00000522414 HSPB11Q9Y547 144 aa5.45□□□□□ -1.54
PVT1-213ENST00000522414 HMSDA8MTL9 139 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 GNRH2O43555 120 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 OR7C2O60412 319 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 PET100P0DJ07 73 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 ARPC5LQ9BPX5 153 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 MRPL32Q9BYC8 188 aaKnown RBP5.44□□□□□ -1.54
PVT1-213ENST00000522414 SMIM3Q9BZL3 60 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 TNFSF18Q9UNG2 199 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 ICOSQ9Y6W8 199 aa5.44□□□□□ -1.54
PVT1-213ENST00000522414 TRGV4A0A0C4DH28 118 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 RNF222A6NCQ9 220 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 DIRC3C9JPN6 131 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 K7EQD1 137 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 CSN1S1P47710 185 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
PVT1-213ENST00000522414 SLAQ13239 276 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 ZNF266Q14584 549 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 MRPL23Q16540 153 aaKnown RBP5.43□□□□□ -1.54
PVT1-213ENST00000522414 TMEM183BQ1AE95 376 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 FFAR4Q5NUL3 377 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 NEGR1Q7Z3B1 354 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 TMEM183AQ8IXX5 376 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 WFDC1Q9HC57 220 aa5.43□□□□□ -1.54
PVT1-213ENST00000522414 DMBT1Q9UGM3 2413 aaPredicted RBP5.43□□□□□ -1.54
PVT1-213ENST00000522414 LOC100131303A0A0U1RQF7 123 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 PGPA6NDG6 321 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 HMGB3O15347 200 aaKnown RBP5.42□□□□□ -1.54
PVT1-213ENST00000522414 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 XGP55808 180 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 KRTAP10-1P60331 282 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 ZNF415Q09FC8 603 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 FAM159AQ6UWV7 190 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 TMUB2Q71RG4 321 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 WFDC10BQ8IUB3 73 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 IQCF2Q8IXL9 164 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 SCGB1C1Q8TD33 95 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 RASL10AQ92737 203 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 TVP23CQ96ET8 276 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 SGK494Q96LW2 274 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 ATP5SQ99766 215 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 KCNIP2Q9NS61 270 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 NAGKQ9UJ70 344 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 RPH3ALQ9UNE2 315 aa5.42□□□□□ -1.54
PVT1-213ENST00000522414 TRAV9-2A0A087WT02 112 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 A0A087WTM6 91 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 TRAV8-1A0A0A6YYK1 113 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 IGHV3-16A0A0C4DH30 117 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 A0A0D9SG52 128 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 RBAKDNA6NC62 111 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 C17orf112F2Z3M2 114 aa5.41□□□□□ -1.54
PVT1-213ENST00000522414 RPL12P30050 165 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms