RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TRAV4A0A0B4J268 109 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 TCRAP04437 139 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 SRIP30626 198 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 C5orf17Q8NAS9 161 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 OR4C5Q8NGB2 326 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 PCNPQ8WW12 178 aaKnown RBP14.14□□□□□ -0.15
SDCBP-209ENST00000522243 NDFIP1Q9BT67 221 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 TNFRSF18Q9Y5U5 241 aa14.14□□□□□ -0.15
SDCBP-209ENST00000522243 MBP02144 154 aa14.13□□□□□ -0.15
SDCBP-209ENST00000522243 BTF3P20290 206 aaKnown RBP14.13□□□□□ -0.15
SDCBP-209ENST00000522243 ZNF80P51504 273 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-209ENST00000522243 KRTAP10-2P60368 255 aa14.13□□□□□ -0.15
SDCBP-209ENST00000522243 SUMO1P63165 101 aaKnown RBP14.13□□□□□ -0.15
SDCBP-209ENST00000522243 SERF2P84101 59 aa14.13□□□□□ -0.15
SDCBP-209ENST00000522243 ACTR3CQ9C0K3 210 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-209ENST00000522243 PSG8Q9UQ74 426 aa14.13□□□□□ -0.15
SDCBP-209ENST00000522243 LOC100131303A0A0U1RQF7 123 aa14.12□□□□□ -0.15
SDCBP-209ENST00000522243 GIPP09681 153 aaPredicted RBP14.12□□□□□ -0.15
SDCBP-209ENST00000522243 RPL7L1Q6DKI1 246 aaKnown RBP14.12□□□□□ -0.15
SDCBP-209ENST00000522243 Q6ZRN7 208 aaPredicted RBP14.12□□□□□ -0.15
SDCBP-209ENST00000522243 SUN5Q8TC36 379 aa14.12□□□□□ -0.15
SDCBP-209ENST00000522243 ASB13Q8WXK3 278 aa14.12□□□□□ -0.15
SDCBP-209ENST00000522243 KCNS1Q96KK3 526 aa14.12□□□□□ -0.15
SDCBP-209ENST00000522243 FXYD6-FXYD2A0A087WZ82 144 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 SERTM2A0A1B0GWG4 89 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 C9JCJ5 164 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 CXorf1O96002 111 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 PRNTQ86SH4 94 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 WFDC10BQ8IUB3 73 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 INO80EQ8NBZ0 244 aaPredicted RBP14.11□□□□□ -0.15
SDCBP-209ENST00000522243 C11orf21Q9P2W6 132 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 TNFSF18Q9UNG2 199 aa14.11□□□□□ -0.15
SDCBP-209ENST00000522243 RNF222A6NCQ9 220 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 GGTLC3B5MD39 225 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 K7EQM0 130 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 CDK2AP2O75956 126 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 GCGP01275 180 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 IGLV2-11P01706 119 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 ORM1P02763 201 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 FLI1Q01543 452 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-209ENST00000522243 TMEM75Q8N9X5 138 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 TMEM167BQ9NRX6 74 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 EPDR1Q9UM22 224 aa14.1□□□□□ -0.15
SDCBP-209ENST00000522243 LY96Q9Y6Y9 160 aa14.09□□□□□ -0.15
SDCBP-209ENST00000522243 CYB561D1Q8N8Q1 229 aa14.08□□□□□ -0.16
SDCBP-209ENST00000522243 TXNDC17Q9BRA2 123 aa14.08□□□□□ -0.16
SDCBP-209ENST00000522243 BORCS7-ASMTA0A0B4J1R7 106 aa14.07□□□□□ -0.16
SDCBP-209ENST00000522243 TAAR5O14804 337 aa14.07□□□□□ -0.16
SDCBP-209ENST00000522243 FUSP35637 526 aaKnown RBP eCLIP14.07□□□□□ -0.16
SDCBP-209ENST00000522243 ZNF726P1Q15940 193 aa14.07□□□□□ -0.16
SDCBP-209ENST00000522243 SMUG1Q53HV7 270 aa14.07□□□□□ -0.16
SDCBP-209ENST00000522243 MAPKAPK5-AS1Q8N8E1 139 aa14.07□□□□□ -0.16
SDCBP-209ENST00000522243 OR2T35Q8NGX2 323 aa14.07□□□□□ -0.16
SDCBP-209ENST00000522243 PFN1P07737 140 aaKnown RBP14.06□□□□□ -0.16
SDCBP-209ENST00000522243 GATA1P15976 413 aaPredicted RBP14.06□□□□□ -0.16
SDCBP-209ENST00000522243 ZNF876PQ49A33 203 aa14.06□□□□□ -0.16
SDCBP-209ENST00000522243 ZFP69Q49AA0 526 aa14.06□□□□□ -0.16
SDCBP-209ENST00000522243 DPPA3Q6W0C5 159 aa14.06□□□□□ -0.16
SDCBP-209ENST00000522243 NHLRC2Q8NBF2 726 aa14.06□□□□□ -0.16
SDCBP-209ENST00000522243 LINC00479Q96M42 142 aa14.06□□□□□ -0.16
SDCBP-209ENST00000522243 PCLOQ9Y6V0 5065 aa14.06□□□□□ -0.16
SDCBP-209ENST00000522243 TRAV9-2A0A087WT02 112 aa14.05□□□□□ -0.16
SDCBP-209ENST00000522243 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
SDCBP-209ENST00000522243 TRAV34A0A0B4J273 112 aa14.05□□□□□ -0.16
SDCBP-209ENST00000522243 FBLL1A6NHQ2 334 aaKnown RBP14.05□□□□□ -0.16
SDCBP-209ENST00000522243 UBE2G2P60604 165 aa14.05□□□□□ -0.16
SDCBP-209ENST00000522243 RYR1P21817 5038 aa14.05□□□□□ -0.16
SDCBP-209ENST00000522243 CTXND1A0A1B0GTU2 59 aa14.04□□□□□ -0.16
SDCBP-209ENST00000522243 A0A1W2PRE2 83 aa14.04□□□□□ -0.16
SDCBP-209ENST00000522243 PGPEP1LA6NFU8 196 aa14.04□□□□□ -0.16
SDCBP-209ENST00000522243 FGF8P55075 233 aaPredicted RBP14.04□□□□□ -0.16
SDCBP-209ENST00000522243 CFAP126Q5VTH2 177 aa14.04□□□□□ -0.16
SDCBP-209ENST00000522243 C9orf85Q96MD7 179 aa14.04□□□□□ -0.16
SDCBP-209ENST00000522243 G3V3Q6 166 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 RS1O15537 224 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 IFNA7P01567 189 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 EVI2AP22794 236 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 ERVFC1-1P60608 527 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 SAPCD1Q5SSQ6 148 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 SLC25A29Q8N8R3 303 aa14.03□□□□□ -0.16
SDCBP-209ENST00000522243 DNAH10OSP0CZ25 163 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 RNASE3P12724 160 aaKnown RBP14.02□□□□□ -0.17
SDCBP-209ENST00000522243 PPT1P50897 306 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 ZNF506Q5JVG8 444 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 AKR1C8PQ5T2L2 129 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 NFE4Q86UQ8 179 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 LRP1BQ9NZR2 4599 aa14.02□□□□□ -0.17
SDCBP-209ENST00000522243 EREGO14944 169 aa14.01□□□□□ -0.17
SDCBP-209ENST00000522243 ARPC5O15511 151 aa14.01□□□□□ -0.17
SDCBP-209ENST00000522243 ARL2-SNX15V9GYD0 113 aa14.01□□□□□ -0.17
SDCBP-209ENST00000522243 HSPG2P98160 4391 aa14□□□□□ -0.17
SDCBP-209ENST00000522243 IGKV3D-20A0A0C4DH25 116 aa14□□□□□ -0.17
SDCBP-209ENST00000522243 CRYGDP07320 174 aa14□□□□□ -0.17
SDCBP-209ENST00000522243 SH2D6Q7Z4S9 175 aa14□□□□□ -0.17
SDCBP-209ENST00000522243 PRADC1Q9BSG0 188 aa14□□□□□ -0.17
SDCBP-209ENST00000522243 FAM74A7A6NL05 159 aa13.99□□□□□ -0.17
SDCBP-209ENST00000522243 SMLR1H3BR10 107 aa13.99□□□□□ -0.17
SDCBP-209ENST00000522243 PEX7O00628 323 aa13.99□□□□□ -0.17
SDCBP-209ENST00000522243 RHOHQ15669 191 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms