RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 PRNTQ86SH4 94 aa12.38□□□□□ -0.43
TRAPPC9-211ENST00000521700 TMEM75Q8N9X5 138 aa12.38□□□□□ -0.43
TRAPPC9-211ENST00000521700 LINC00479Q96M42 142 aa12.38□□□□□ -0.43
TRAPPC9-211ENST00000521700 NBDYA0A0U1RRE5 68 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 A0A1B0GVY2 172 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 PAX4O43316 350 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 KCNS1Q96KK3 526 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 SDF2L1Q9HCN8 221 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 C11orf21Q9P2W6 132 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 HECTD4Q9Y4D8 3996 aa12.37□□□□□ -0.43
TRAPPC9-211ENST00000521700 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 FAM74A7A6NL05 159 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 GCGP01275 180 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 IFNA7P01567 189 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 CRYBA4P53673 196 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 SLAQ13239 276 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 C1orf134Q5TEV5 83 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 ZNF479Q96JC4 524 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 Q9H8V8 135 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
TRAPPC9-211ENST00000521700 A0A0D9SG52 128 aa12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 FHITP49789 147 aa12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 SMUG1Q53HV7 270 aa12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 SOHLH1Q5JUK2 328 aa12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 SAPCD1Q5SSQ6 148 aa12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 NKX6-2Q9C056 277 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-211ENST00000521700 M0R2P5 195 aa12.34□□□□□ -0.43
TRAPPC9-211ENST00000521700 PFN1P07737 140 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-211ENST00000521700 SEC11BP0C7V7 166 aa12.34□□□□□ -0.43
TRAPPC9-211ENST00000521700 UPK3BQ9BT76 320 aa12.34□□□□□ -0.43
TRAPPC9-211ENST00000521700 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-211ENST00000521700 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
TRAPPC9-211ENST00000521700 PEX7O00628 323 aa12.33□□□□□ -0.44
TRAPPC9-211ENST00000521700 BCL2L11O43521 198 aa12.33□□□□□ -0.44
TRAPPC9-211ENST00000521700 ZFP69Q49AA0 526 aa12.33□□□□□ -0.44
TRAPPC9-211ENST00000521700 ZNF471Q9BX82 626 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-211ENST00000521700 ICOSQ9Y6W8 199 aa12.33□□□□□ -0.44
TRAPPC9-211ENST00000521700 KANTRA0A1W2PQU2 76 aa12.32□□□□□ -0.44
TRAPPC9-211ENST00000521700 PPT1P50897 306 aa12.32□□□□□ -0.44
TRAPPC9-211ENST00000521700 STOML3Q8TAV4 291 aa12.32□□□□□ -0.44
TRAPPC9-211ENST00000521700 HIST1H2BAQ96A08 127 aa12.32□□□□□ -0.44
TRAPPC9-211ENST00000521700 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
TRAPPC9-211ENST00000521700 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
TRAPPC9-211ENST00000521700 TMUB2Q71RG4 321 aa12.31□□□□□ -0.44
TRAPPC9-211ENST00000521700 OR4C5Q8NGB2 326 aa12.31□□□□□ -0.44
TRAPPC9-211ENST00000521700 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
TRAPPC9-211ENST00000521700 UMAD1C9J7I0 102 aa12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 Q86TA4 180 aa12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 C6orf223Q8N319 242 aa12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 SFT2D1Q8WV19 159 aa12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 KRTAP1-5Q9BYS1 174 aa12.3□□□□□ -0.44
TRAPPC9-211ENST00000521700 C9JCJ5 164 aa12.29□□□□□ -0.44
TRAPPC9-211ENST00000521700 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
TRAPPC9-211ENST00000521700 CST9LP1Q5W188 147 aa12.29□□□□□ -0.44
TRAPPC9-211ENST00000521700 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
TRAPPC9-211ENST00000521700 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
TRAPPC9-211ENST00000521700 PKD1P98161 4303 aa12.29□□□□□ -0.44
TRAPPC9-211ENST00000521700 IGKV3D-20A0A0C4DH25 116 aa12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 PAGE4O60829 102 aa12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 PFDN1O60925 122 aa12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 CRIP1P50238 77 aa12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 EIF5AP63241 154 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-211ENST00000521700 A0A1B0GV50 99 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 K7EQD1 137 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 GYPEP15421 78 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 TTC32Q5I0X7 151 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 DPPA3Q6W0C5 159 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
TRAPPC9-211ENST00000521700 PGPEP1LA6NFU8 196 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 RS1O15537 224 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 ORM1P02763 201 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 TPT1P13693 172 aaKnown RBP12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 TNP2Q05952 138 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 COX8CQ7Z4L0 72 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 PTH2Q96A98 100 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 ZC2HC1AQ96GY0 325 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 FMC1Q96HJ9 113 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
TRAPPC9-211ENST00000521700 TRBV6-1A0A0K0K1D8 114 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 A0A1W2PPQ1 181 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 SIVA1O15304 175 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 NXPH4O95158 308 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 H2AFB1P0C5Y9 115 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 SRIP30626 198 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 UBE2G1P62253 170 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 CFAP126Q5VTH2 177 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 Q6ZNX1 250 aa12.25□□□□□ -0.45
TRAPPC9-211ENST00000521700 TCTE3Q8IZS6 198 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms