RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 IGLV3-1P01715 115 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 IGHV3-30P01768 117 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 ANGP03950 147 aaKnown RBP1.42□□□□□ -2.18
PTPN12-214ENST00000520947 IGHV3-30-5P0DP03 117 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 PDE6GP18545 87 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 SELENOWP63302 87 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 SCIMPQ6UWF3 145 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 SNX29P2Q8IUI4 249 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 ARL11Q969Q4 196 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 LIMD2Q9BT23 127 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 TMEM191AQ9H0A3 160 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 WFDC10AQ9H1F0 79 aa1.42□□□□□ -2.18
PTPN12-214ENST00000520947 TNRC6BQ9UPQ9 1833 aaKnown RBP1.42□□□□□ -2.18
PTPN12-214ENST00000520947 KIAA1549LQ6ZVL6 1849 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 CEP192Q8TEP8 1941 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 J3QLW9 94 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 KLF7O75840 302 aaPredicted RBP1.41□□□□□ -2.18
PTPN12-214ENST00000520947 IGF2P01344 180 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 PPDPFLQ8WWR9 84 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 CCDC167Q9P0B6 97 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 BOKQ9UMX3 212 aaPredicted RBP1.41□□□□□ -2.18
PTPN12-214ENST00000520947 TMEM2Q9UHN6 1383 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
PTPN12-214ENST00000520947 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.4□□□□□ -2.18
PTPN12-214ENST00000520947 INTS1Q8N201 2190 aaKnown RBP1.4□□□□□ -2.19
PTPN12-214ENST00000520947 TRAV23DV6A0A075B6W5 121 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 TMEM30CPA0ZSE6 113 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 GYPBP06028 91 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 GUCA1AP43080 201 aaPredicted RBP1.4□□□□□ -2.19
PTPN12-214ENST00000520947 POLR2JP52435 117 aaKnown RBP1.4□□□□□ -2.19
PTPN12-214ENST00000520947 RHOHQ15669 191 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 RPL13AP3Q6NVV1 102 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 SLC25A26Q70HW3 274 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 ODF3Q96PU9 254 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 C22orf24Q9Y442 160 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 CACNA1BQ00975 2339 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 NCOA3Q9Y6Q9 1424 aa1.4□□□□□ -2.19
PTPN12-214ENST00000520947 KIAA1549Q9HCM3 1950 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 KMT2BQ9UMN6 2715 aaPredicted RBP1.39□□□□□ -2.19
PTPN12-214ENST00000520947 NUPR2A6NF83 97 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 ARL14EPLP0DKL9 152 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 EMX2Q04743 252 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 DYNLRB2Q8TF09 96 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 DMAC1Q96GE9 116 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 LINC00470Q9BZP3 86 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 ARFGEF3Q5TH69 2177 aa1.39□□□□□ -2.19
PTPN12-214ENST00000520947 ADGRB1O14514 1584 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 PEG3Q9GZU2 1588 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 A0A0G2JMM0 328 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 PYYP10082 97 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-214ENST00000520947 RPL37AP61513 92 aaKnown RBP1.38□□□□□ -2.19
PTPN12-214ENST00000520947 RRAS2P62070 204 aaPredicted RBP1.38□□□□□ -2.19
PTPN12-214ENST00000520947 OCIAD2Q56VL3 154 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 CSAG1Q6PB30 78 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 UNQ5815/PRO19632Q6UWF5 114 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 LYPD5Q6UWN5 251 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 VSTM2AQ8TAG5 236 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 SCN3AQ9NY46 2000 aa1.38□□□□□ -2.19
PTPN12-214ENST00000520947 WDR7Q9Y4E6 1490 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 COL6A6A6NMZ7 2263 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 KIDINS220Q9ULH0 1771 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 MUC4Q99102 2169 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 ALPK3Q96L96 1907 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 FAM92AA1XBS5 289 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 LINC01545Q5VT33 79 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 Q6ZUT4 128 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 AMELYQ99218 206 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 SDF2Q99470 211 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 PSMG3Q9BT73 122 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-214ENST00000520947 ATG5Q9H1Y0 275 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 SIP14410 1827 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 MCM3APO60318 1980 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 PEAK1Q9H792 1746 aa1.37□□□□□ -2.19
PTPN12-214ENST00000520947 TRAV17A0A0B4J275 112 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 CCDC179H3BU77 68 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 M0R129 80 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 IGKCP01834 107 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 IL7P13232 177 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 SBSPONQ8IVN8 264 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 FANCMQ8IYD8 2048 aa1.36□□□□□ -2.19
PTPN12-214ENST00000520947 MRPL35Q9NZE8 188 aaKnown RBP1.36□□□□□ -2.19
PTPN12-214ENST00000520947 MRPL36Q9P0J6 103 aaKnown RBP1.36□□□□□ -2.19
PTPN12-214ENST00000520947 TRBV10-1A0A0K0K1A3 114 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 FAM25AB3EWG3 89 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 FAM25CB3EWG5 89 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 FAM25GB3EWG6 89 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 NCR3O14931 201 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 GNG7O60262 68 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 LINC00575Q6W349 94 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 NDUFA11Q86Y39 141 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 KCNRGQ8N5I3 272 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 LRP5O75197 1615 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 PHRF1Q9P1Y6 1649 aaKnown RBP1.35□□□□□ -2.19
PTPN12-214ENST00000520947 BCL9LQ86UU0 1499 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 CDK12Q9NYV4 1490 aaPredicted RBP1.35□□□□□ -2.19
PTPN12-214ENST00000520947 FLG2Q5D862 2391 aaPredicted RBP1.35□□□□□ -2.19
PTPN12-214ENST00000520947 E9PCH4 1651 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 UNC13CQ8NB66 2214 aa1.35□□□□□ -2.19
PTPN12-214ENST00000520947 HEATR1Q9H583 2144 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms