RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 LENEPQ9Y5L5 61 aa7.66□□□□□ -1.18
MRPS28-206ENST00000520946 IGHV3-73A0A0B4J1V6 119 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 TRAV21A0A0B4J279 112 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 IGSF23A1L1A6 192 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 C17orf112F2Z3M2 114 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 GATA1P15976 413 aaPredicted RBP7.65□□□□□ -1.18
MRPS28-206ENST00000520946 LAGE3Q14657 143 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 RMI2Q96E14 147 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 PHYHIPLQ96FC7 376 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 KCNS1Q96KK3 526 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 COX11Q9Y6N1 276 aa7.65□□□□□ -1.18
MRPS28-206ENST00000520946 GGTLC3B5MD39 225 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 CIDEAO60543 219 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 OXTP01178 125 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 UBE2L3P68036 154 aaKnown RBP7.64□□□□□ -1.19
MRPS28-206ENST00000520946 ZNF876PQ49A33 203 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 SLC25A29Q8N8R3 303 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 FXYD5Q96DB9 178 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 FAM167A-AS1Q96KT0 104 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 GTSF1LQ9H1H1 148 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 URGCP-MRPS24S4R325 110 aa7.64□□□□□ -1.19
MRPS28-206ENST00000520946 TRAV6A0A075B6T7 132 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 DIRC3C9JPN6 131 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 TAS2R45P59539 299 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 RAB32Q13637 225 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 ACOT6Q3I5F7 207 aaPredicted RBP7.63□□□□□ -1.19
MRPS28-206ENST00000520946 SCXQ7RTU7 201 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 Q8N976 141 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 OR5C1Q8NGR4 320 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 ASB13Q8WXK3 278 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 BAALCQ8WXS3 180 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
MRPS28-206ENST00000520946 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 TYMSP04818 313 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 SEC11BP0C7V7 166 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 ASAH1Q13510 395 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 LINC01620Q4KN68 170 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 KHDC3LQ587J8 217 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 Q6ZSA8 131 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 SEC22CQ9BRL7 303 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 TREM1Q9NP99 234 aa7.62□□□□□ -1.19
MRPS28-206ENST00000520946 FAT1Q14517 4588 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 PGPA6NDG6 321 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 F6UZH7 168 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 RS1O15537 224 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 TCRBP04435 133 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 BTCP35070 178 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 NHLH2Q02577 135 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 KCNIP4Q6PIL6 250 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
MRPS28-206ENST00000520946 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 IGKV2D-24A0A075B6R9 120 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 TRAV8-1A0A0A6YYK1 113 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 LYRM1O43325 122 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 MGST1P10620 155 aaKnown RBP7.6□□□□□ -1.19
MRPS28-206ENST00000520946 IL7P13232 177 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 WFDC2Q14508 124 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 CFAP126Q5VTH2 177 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 GOLT1AQ6ZVE7 132 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 SCGB1C1Q8TD33 95 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 CHAC1Q9BUX1 264 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 OTORQ9NRC9 128 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 NUDT15Q9NV35 164 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 MBD2Q9UBB5 411 aa7.6□□□□□ -1.19
MRPS28-206ENST00000520946 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
MRPS28-206ENST00000520946 GAGE1Q13065 139 aa7.59□□□□□ -1.19
MRPS28-206ENST00000520946 GAGE4Q13068 117 aa7.59□□□□□ -1.19
MRPS28-206ENST00000520946 GAGE5Q13069 117 aa7.59□□□□□ -1.19
MRPS28-206ENST00000520946 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
MRPS28-206ENST00000520946 FFAR4Q5NUL3 377 aa7.59□□□□□ -1.19
MRPS28-206ENST00000520946 DAZ4Q86SG3 579 aaKnown RBP7.59□□□□□ -1.19
MRPS28-206ENST00000520946 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
MRPS28-206ENST00000520946 DAZ3Q9NR90 486 aaKnown RBP7.59□□□□□ -1.19
MRPS28-206ENST00000520946 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 A0A087WWC5 75 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 A0A1W2PPV4 95 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 K7EQM0 130 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 TAAR5O14804 337 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 IGLV2-8P01709 118 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 H2AFB2P0C5Z0 115 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 ZFP69Q49AA0 526 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 LRRC37A5PQ49AS3 106 aa7.58□□□□□ -1.2
MRPS28-206ENST00000520946 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
MRPS28-206ENST00000520946 FGF8P55075 233 aaPredicted RBP7.57□□□□□ -1.2
MRPS28-206ENST00000520946 RPL37AP61513 92 aaKnown RBP7.57□□□□□ -1.2
MRPS28-206ENST00000520946 ELOBQ15370 118 aa7.57□□□□□ -1.2
MRPS28-206ENST00000520946 LGALSLQ3ZCW2 172 aaPredicted RBP7.57□□□□□ -1.2
MRPS28-206ENST00000520946 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
MRPS28-206ENST00000520946 A0A087WX48 190 aa7.56□□□□□ -1.2
MRPS28-206ENST00000520946 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
MRPS28-206ENST00000520946 Q8N3U1 123 aa7.56□□□□□ -1.2
MRPS28-206ENST00000520946 OR2T35Q8NGX2 323 aa7.56□□□□□ -1.2
MRPS28-206ENST00000520946 SGK494Q96LW2 274 aa7.56□□□□□ -1.2
MRPS28-206ENST00000520946 KLK12Q9UKR0 248 aa7.56□□□□□ -1.2
MRPS28-206ENST00000520946 FAM240BA0A1B0GVZ2 78 aa7.55□□□□□ -1.2
MRPS28-206ENST00000520946 RNF222A6NCQ9 220 aa7.55□□□□□ -1.2
MRPS28-206ENST00000520946 PGPEP1LA6NFU8 196 aa7.55□□□□□ -1.2
MRPS28-206ENST00000520946 A8MWV9 139 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms