RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 SPATA45Q537H7 98 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 IGFL4Q6B9Z1 124 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 UNQ9165/PRO28630Q6UXU0 137 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 IL17RELQ6ZVW7 336 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 SMIM15Q7Z3B0 74 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 RNF182Q8N6D2 247 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 KLHDC1Q8N7A1 406 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 TPPP3Q9BW30 176 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
SPARC-202ENST00000520687 IGHV4-4A0A075B6R2 117 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 TRBV12-3P01733 135 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 IGHV3-11P01762 117 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 TWIST1Q15672 202 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 KRTAP24-1Q3LI83 254 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 FA2HQ7L5A8 372 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 Q8N2B8 174 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 MYOZ3Q8TDC0 251 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 UBE2E2Q96LR5 201 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 TMEM70Q9BUB7 260 aa7.57□□□□□ -1.2
SPARC-202ENST00000520687 IGHV3OR16-13A0A075B7E8 117 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 IGHV3-49A0A0A0MS15 119 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 IGHV3-74A0A0B4J1X5 117 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 TRAV21A0A0B4J279 112 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 CRXO43186 299 aaPredicted RBP7.56□□□□□ -1.2
SPARC-202ENST00000520687 LGALS1P09382 135 aaKnown RBP7.56□□□□□ -1.2
SPARC-202ENST00000520687 MED14OSP0DP75 135 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 Q6ZS46 218 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 APRG1Q8IVJ8 170 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 FAM19A2Q8N3H0 131 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 PRSS3P2Q8NHM4 247 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 Q96MF0 132 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
SPARC-202ENST00000520687 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 LEPROTL1O95214 131 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 NPSP0C0P6 89 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 URB1-AS1Q96HZ7 61 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 PRELID3AQ96N28 172 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 ODF3Q96PU9 254 aa7.55□□□□□ -1.2
SPARC-202ENST00000520687 IGHV1-24A0A0C4DH33 117 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 C2orf70A6NJV1 201 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 SNAI2O43623 268 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 RPL11P62913 178 aaKnown RBP7.54□□□□□ -1.2
SPARC-202ENST00000520687 MRPL51Q4U2R6 128 aaKnown RBP7.54□□□□□ -1.2
SPARC-202ENST00000520687 OR8A1Q8NGG7 326 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 OR10AG1Q8NH19 301 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 WFDC12Q8WWY7 111 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 FAM19A4Q96LR4 140 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 MAP1LC3CQ9BXW4 147 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 MRPS16Q9Y3D3 137 aaKnown RBP7.54□□□□□ -1.2
SPARC-202ENST00000520687 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 TMEM213A2RRL7 107 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 CKS2P33552 79 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
SPARC-202ENST00000520687 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 DEFB125Q8N687 156 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
SPARC-202ENST00000520687 TRAV9-2A0A087WT02 112 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 LINC01546A6NGU7 62 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 D6R8Y8 96 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 M0QZ24 198 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 TCF21O43680 179 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 SNRPD3P62318 126 aaKnown RBP7.53□□□□□ -1.2
SPARC-202ENST00000520687 PSMG4Q5JS54 123 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 EBLN2Q6P2I7 272 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 Q6ZN92 141 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
SPARC-202ENST00000520687 NXT2Q9NPJ8 142 aaKnown RBP7.53□□□□□ -1.2
SPARC-202ENST00000520687 PRSS47A8MTI9 375 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 HOXA3O43365 443 aaPredicted RBP7.52□□□□□ -1.21
SPARC-202ENST00000520687 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 BATFQ16520 125 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 AMN1Q8IY45 258 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 STPG4Q8N801 248 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 ZANQ9Y493 2812 aa7.52□□□□□ -1.21
SPARC-202ENST00000520687 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 DUSP14O95147 198 aaKnown RBP7.51□□□□□ -1.21
SPARC-202ENST00000520687 TSPOP30536 169 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 LEPP41159 167 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 ASIPP42127 132 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 MAPK1IP1LQ8NDC0 245 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 DCANP1Q8TF63 244 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 MRAP2Q96G30 205 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
SPARC-202ENST00000520687 PPP1R17O96001 155 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 TFPI2P48307 235 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 TMEM95Q3KNT9 176 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 ST20Q9HBF5 79 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 KLLNB2CW77 178 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 HSBP1L1C9JCN9 74 aa7.5□□□□□ -1.21
SPARC-202ENST00000520687 CSN3P07498 182 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms