RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
CLK4-204ENST00000520126 CSMD3Q7Z407 3707 aa12.2□□□□□ -0.46
CLK4-204ENST00000520126 ATP5G1P05496 136 aa12.19□□□□□ -0.46
CLK4-204ENST00000520126 PFN1P07737 140 aaKnown RBP12.19□□□□□ -0.46
CLK4-204ENST00000520126 TCL1AP56279 114 aa12.19□□□□□ -0.46
CLK4-204ENST00000520126 NHLRC2Q8NBF2 726 aa12.19□□□□□ -0.46
CLK4-204ENST00000520126 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
CLK4-204ENST00000520126 ZFP30Q9Y2G7 519 aa12.19□□□□□ -0.46
CLK4-204ENST00000520126 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
CLK4-204ENST00000520126 OR5I1Q13606 314 aa12.18□□□□□ -0.46
CLK4-204ENST00000520126 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
CLK4-204ENST00000520126 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
CLK4-204ENST00000520126 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
CLK4-204ENST00000520126 LCE6AA0A183 80 aa12.17□□□□□ -0.46
CLK4-204ENST00000520126 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
CLK4-204ENST00000520126 ORM1P02763 201 aa12.17□□□□□ -0.46
CLK4-204ENST00000520126 TYMSP04818 313 aa12.17□□□□□ -0.46
CLK4-204ENST00000520126 S100A9P06702 114 aaKnown RBP12.17□□□□□ -0.46
CLK4-204ENST00000520126 ZC2HC1AQ96GY0 325 aa12.17□□□□□ -0.46
CLK4-204ENST00000520126 TENM2Q9NT68 2774 aa12.17□□□□□ -0.46
CLK4-204ENST00000520126 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
CLK4-204ENST00000520126 TMEM88Q6PEY1 159 aa12.16□□□□□ -0.46
CLK4-204ENST00000520126 BAGE2Q86Y30 109 aa12.16□□□□□ -0.46
CLK4-204ENST00000520126 C11orf21Q9P2W6 132 aa12.16□□□□□ -0.46
CLK4-204ENST00000520126 M0R036 132 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 SPINK4O60575 86 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 LTAP01374 205 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 BCL2P10415 239 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
CLK4-204ENST00000520126 TXNDC17Q9BRA2 123 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 APLNQ9ULZ1 77 aa12.15□□□□□ -0.46
CLK4-204ENST00000520126 TMSB15BA0A087X1C1 80 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 IGHV3-16A0A0C4DH30 117 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 SH2D1AO60880 128 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
CLK4-204ENST00000520126 RPL35P42766 123 aaKnown RBP12.14□□□□□ -0.47
CLK4-204ENST00000520126 TDRG1Q3Y452 100 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 FAM162BQ5T6X4 162 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 LCE2AQ5TA79 106 aaPredicted RBP12.14□□□□□ -0.47
CLK4-204ENST00000520126 PRR27Q6MZM9 219 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
CLK4-204ENST00000520126 DERL1Q9BUN8 251 aa12.14□□□□□ -0.47
CLK4-204ENST00000520126 A0A0J9YY99 117 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 TRBV6-1A0A0K0K1D8 114 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 B4DEV8 164 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 C9JCJ5 164 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 PDE6DO43924 150 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 NUDT3O95989 172 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 TCTAP57738 103 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 SPXQ9BT56 116 aa12.13□□□□□ -0.47
CLK4-204ENST00000520126 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
CLK4-204ENST00000520126 CRIP1P50238 77 aa12.12□□□□□ -0.47
CLK4-204ENST00000520126 CEBPGP53567 150 aa12.12□□□□□ -0.47
CLK4-204ENST00000520126 LINC00612Q8N6U2 182 aa12.12□□□□□ -0.47
CLK4-204ENST00000520126 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
CLK4-204ENST00000520126 RAB19A4D1S5 217 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 GRIFINA4D1Z8 144 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 RBFOX3A6NFN3 312 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 TAGLN2P37802 199 aaKnown RBP12.11□□□□□ -0.47
CLK4-204ENST00000520126 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 EIF5A2Q9GZV4 153 aaKnown RBP12.11□□□□□ -0.47
CLK4-204ENST00000520126 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 M0R2P5 195 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 ASIPP42127 132 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 ZNF674Q2M3X9 581 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 TEX261Q6UWH6 196 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 FAM210BQ96KR6 192 aa12.11□□□□□ -0.47
CLK4-204ENST00000520126 TRAV26-1A0A087WT03 109 aa12.1□□□□□ -0.47
CLK4-204ENST00000520126 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
CLK4-204ENST00000520126 HOXA5P20719 270 aa12.1□□□□□ -0.47
CLK4-204ENST00000520126 GNG4P50150 75 aa12.1□□□□□ -0.47
CLK4-204ENST00000520126 TOR2AQ5JU69 321 aa12.1□□□□□ -0.47
CLK4-204ENST00000520126 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
CLK4-204ENST00000520126 TRGV4A0A0C4DH28 118 aa12.09□□□□□ -0.47
CLK4-204ENST00000520126 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
CLK4-204ENST00000520126 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
CLK4-204ENST00000520126 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
CLK4-204ENST00000520126 KRBOX1C9JBD0 128 aa12.08□□□□□ -0.48
CLK4-204ENST00000520126 H3BVH4 76 aa12.08□□□□□ -0.48
CLK4-204ENST00000520126 COX8CQ7Z4L0 72 aa12.08□□□□□ -0.48
CLK4-204ENST00000520126 C15orf53Q8NAA6 179 aa12.08□□□□□ -0.48
CLK4-204ENST00000520126 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
CLK4-204ENST00000520126 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
CLK4-204ENST00000520126 PGPEP1LA6NFU8 196 aa12.07□□□□□ -0.48
CLK4-204ENST00000520126 RPL19P84098 196 aaKnown RBP12.07□□□□□ -0.48
CLK4-204ENST00000520126 LYPD6BQ8NI32 183 aa12.07□□□□□ -0.48
CLK4-204ENST00000520126 RASL10AQ92737 203 aa12.07□□□□□ -0.48
CLK4-204ENST00000520126 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
CLK4-204ENST00000520126 MLST8Q9BVC4 326 aa12.07□□□□□ -0.48
CLK4-204ENST00000520126 KMT2CQ8NEZ4 4911 aaKnown RBP12.06□□□□□ -0.48
CLK4-204ENST00000520126 DYNC2H1Q8NCM8 4307 aaKnown RBP12.06□□□□□ -0.48
CLK4-204ENST00000520126 P0DMU3 169 aa12.06□□□□□ -0.48
CLK4-204ENST00000520126 FAM231AP0DMU4 169 aa12.06□□□□□ -0.48
CLK4-204ENST00000520126 FAM231CP0DMU5 169 aa12.06□□□□□ -0.48
CLK4-204ENST00000520126 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
CLK4-204ENST00000520126 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms