RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 TMED6Q8WW62 240 aa7.53□□□□□ -1.2
IGHV1-17-201ENST00000520119 RASL10AQ92737 203 aa7.53□□□□□ -1.2
IGHV1-17-201ENST00000520119 SCRT2Q9NQ03 307 aa7.53□□□□□ -1.2
IGHV1-17-201ENST00000520119 MDFICQ9P1T7 246 aa7.53□□□□□ -1.2
IGHV1-17-201ENST00000520119 HSPB11Q9Y547 144 aa7.53□□□□□ -1.2
IGHV1-17-201ENST00000520119 K7EP13 123 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 MPC2O95563 127 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 ORM1P02763 201 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 SRIP30626 198 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 TMEM183BQ1AE95 376 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 TDRG1Q3Y452 100 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 TMEM183AQ8IXX5 376 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 MARVELD1Q9BSK0 173 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 OTORQ9NRC9 128 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 PTTG2Q9NZH5 202 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 LY96Q9Y6Y9 160 aa7.52□□□□□ -1.21
IGHV1-17-201ENST00000520119 K7EQD1 137 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 SSNA1O43805 119 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 SFTA3P0C7M3 94 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 RPL12P30050 165 aaKnown RBP7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 FAM74A1Q5RGS3 127 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 ARL6IP6Q8N6S5 226 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 CMTM2Q8TAZ6 248 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 PCNPQ8WW12 178 aaKnown RBP7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 ZNF479Q96JC4 524 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 HYLS1Q96M11 299 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
IGHV1-17-201ENST00000520119 PGPA6NDG6 321 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 GYPEP15421 78 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 EVI2AP22794 236 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 IFITM3Q01628 133 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 PQLC2Q6ZP29 291 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 TXNDC17Q9BRA2 123 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 SMIM3Q9BZL3 60 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 MBD2Q9UBB5 411 aa7.5□□□□□ -1.21
IGHV1-17-201ENST00000520119 TRAV4A0A0B4J268 109 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 TRAV21A0A0B4J279 112 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 A0A1W2PPV4 95 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 C9JCJ5 164 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 M0R2P5 195 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 DEFA1P59665 94 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 DEFA3P59666 94 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 ACOT6Q3I5F7 207 aaPredicted RBP7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 SH2D6Q7Z4S9 175 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 OR4C5Q8NGB2 326 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 NAGKQ9UJ70 344 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 TNFRSF18Q9Y5U5 241 aa7.49□□□□□ -1.21
IGHV1-17-201ENST00000520119 DNAH10OSP0CZ25 163 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 FAT1Q14517 4588 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 GOLT1AQ6ZVE7 132 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 WFDC10BQ8IUB3 73 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 KCNS1Q96KK3 526 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 TREM1Q9NP99 234 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 MSRB1Q9NZV6 116 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 RPH3ALQ9UNE2 315 aa7.48□□□□□ -1.21
IGHV1-17-201ENST00000520119 A0A087WTM6 91 aa7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 GNRH2O43555 120 aa7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 EIF3GO75821 320 aaKnown RBP eCLIP7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 C10orf126Q8N4M7 172 aa7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 WFDC1Q9HC57 220 aa7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 SDF2L1Q9HCN8 221 aa7.47□□□□□ -1.21
IGHV1-17-201ENST00000520119 TRAV8-1A0A0A6YYK1 113 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 SERTM2A0A1B0GWG4 89 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 EPM2AB3EWF7 344 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 TYMSP04818 313 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 CRYGDP07320 174 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 TIRAPP58753 221 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 RAB2AP61019 212 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 OR10G9Q8NGN4 311 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 OR10G7Q8NGN6 311 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 ASB13Q8WXK3 278 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 TVP23CQ96ET8 276 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
IGHV1-17-201ENST00000520119 F6UZH7 168 aa7.45□□□□□ -1.22
IGHV1-17-201ENST00000520119 CIDEAO60543 219 aa7.45□□□□□ -1.22
IGHV1-17-201ENST00000520119 GATA1P15976 413 aaPredicted RBP7.45□□□□□ -1.22
IGHV1-17-201ENST00000520119 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.22
IGHV1-17-201ENST00000520119 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
IGHV1-17-201ENST00000520119 NHLRC2Q8NBF2 726 aa7.45□□□□□ -1.22
IGHV1-17-201ENST00000520119 IGHV3-38A0A0C4DH36 116 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 LOC100131303A0A0U1RQF7 123 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 FBLL1A6NHQ2 334 aaKnown RBP7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 K7EQM0 130 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 HMGB3O15347 200 aaKnown RBP7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 PFN1P07737 140 aaKnown RBP7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 STAG3L2P0CL84 134 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 ARL14EPLP0DKL9 152 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 XGP55808 180 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 GNG5P63218 68 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 ZNF876PQ49A33 203 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 C5orf17Q8NAS9 161 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 OR2G3Q8NGZ4 309 aa7.44□□□□□ -1.22
IGHV1-17-201ENST00000520119 TRBV6-4A0A1B0GX49 114 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms