RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 NFE4Q86UQ8 179 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 HSD17B11Q8NBQ5 300 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 TVP23CQ96ET8 276 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 AQP10Q96PS8 301 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 TXNDC17Q9BRA2 123 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 NDFIP1Q9BT67 221 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 SDF2L1Q9HCN8 221 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 TRAV8-1A0A0A6YYK1 113 aa17.29■□□□□ 0.36
VEGFA-220ENST00000519767 GYPEP15421 78 aa17.29■□□□□ 0.36
VEGFA-220ENST00000519767 Q6ZRN7 208 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-220ENST00000519767 SUN5Q8TC36 379 aa17.29■□□□□ 0.36
VEGFA-220ENST00000519767 RAB24Q969Q5 203 aa17.29■□□□□ 0.36
VEGFA-220ENST00000519767 LRP1BQ9NZR2 4599 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 C9JCJ5 164 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 GNG5P63218 68 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 SH2D6Q7Z4S9 175 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 C5orf17Q8NAS9 161 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 ASB13Q8WXK3 278 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 LY96Q9Y6Y9 160 aa17.28■□□□□ 0.36
VEGFA-220ENST00000519767 HSPG2P98160 4391 aa17.27■□□□□ 0.36
VEGFA-220ENST00000519767 EREGO14944 169 aa17.27■□□□□ 0.36
VEGFA-220ENST00000519767 ATP6V0CP27449 155 aa17.27■□□□□ 0.36
VEGFA-220ENST00000519767 KRTAP10-2P60368 255 aa17.27■□□□□ 0.36
VEGFA-220ENST00000519767 PGPEP1Q9NXJ5 209 aa17.27■□□□□ 0.36
VEGFA-220ENST00000519767 F6UZH7 168 aa17.26■□□□□ 0.35
VEGFA-220ENST00000519767 TCRAP04437 139 aa17.26■□□□□ 0.35
VEGFA-220ENST00000519767 TYMSP04818 313 aa17.26■□□□□ 0.35
VEGFA-220ENST00000519767 GCHFRP30047 84 aa17.26■□□□□ 0.35
VEGFA-220ENST00000519767 TMEM167BQ9NRX6 74 aa17.26■□□□□ 0.35
VEGFA-220ENST00000519767 TNFSF18Q9UNG2 199 aa17.26■□□□□ 0.35
VEGFA-220ENST00000519767 TAAR5O14804 337 aa17.25■□□□□ 0.35
VEGFA-220ENST00000519767 MAPKAPK5-AS1Q8N8E1 139 aa17.25■□□□□ 0.35
VEGFA-220ENST00000519767 KRTAP4-5Q9BYR2 181 aa17.25■□□□□ 0.35
VEGFA-220ENST00000519767 ACTR3CQ9C0K3 210 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-220ENST00000519767 ABCA13Q86UQ4 5058 aa17.25■□□□□ 0.35
VEGFA-220ENST00000519767 FBLL1A6NHQ2 334 aaKnown RBP17.24■□□□□ 0.35
VEGFA-220ENST00000519767 CIDEAO60543 219 aa17.24■□□□□ 0.35
VEGFA-220ENST00000519767 CXorf1O96002 111 aa17.24■□□□□ 0.35
VEGFA-220ENST00000519767 EVI2AP22794 236 aa17.24■□□□□ 0.35
VEGFA-220ENST00000519767 INO80EQ8NBZ0 244 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-220ENST00000519767 ERVFC1-1P60608 527 aa17.23■□□□□ 0.35
VEGFA-220ENST00000519767 SUMO1P63165 101 aaKnown RBP17.23■□□□□ 0.35
VEGFA-220ENST00000519767 SGK494Q96LW2 274 aa17.23■□□□□ 0.35
VEGFA-220ENST00000519767 PSG8Q9UQ74 426 aa17.23■□□□□ 0.35
VEGFA-220ENST00000519767 GIPP09681 153 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-220ENST00000519767 EPDR1Q9UM22 224 aa17.22■□□□□ 0.35
VEGFA-220ENST00000519767 DNAH10OSP0CZ25 163 aa17.21■□□□□ 0.35
VEGFA-220ENST00000519767 GATA1P15976 413 aaPredicted RBP17.21■□□□□ 0.35
VEGFA-220ENST00000519767 TIRAPP58753 221 aa17.21■□□□□ 0.35
VEGFA-220ENST00000519767 GCGP01275 180 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 PFN1P07737 140 aaKnown RBP17.2■□□□□ 0.34
VEGFA-220ENST00000519767 FLI1Q01543 452 aaPredicted RBP17.2■□□□□ 0.34
VEGFA-220ENST00000519767 ZNF876PQ49A33 203 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 ZFP69Q49AA0 526 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 SMUG1Q53HV7 270 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 Q5BKY6 102 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 SAPCD1Q5SSQ6 148 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 CYB561D1Q8N8Q1 229 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 MSRB1Q9NZV6 116 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 BOLA1Q9Y3E2 137 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 TNFRSF18Q9Y5U5 241 aa17.2■□□□□ 0.34
VEGFA-220ENST00000519767 BORCS7-ASMTA0A0B4J1R7 106 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 IGLV2-11P01706 119 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 ZNF80P51504 273 aaPredicted RBP17.19■□□□□ 0.34
VEGFA-220ENST00000519767 WFDC10BQ8IUB3 73 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 Q8N1X5 172 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 C10orf126Q8N4M7 172 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 PTH2Q96A98 100 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 SH3BGRL3Q9H299 93 aa17.19■□□□□ 0.34
VEGFA-220ENST00000519767 A0A1W2PRE2 83 aa17.18■□□□□ 0.34
VEGFA-220ENST00000519767 CDPF1Q6NVV7 123 aa17.18■□□□□ 0.34
VEGFA-220ENST00000519767 TMEM75Q8N9X5 138 aa17.18■□□□□ 0.34
VEGFA-220ENST00000519767 NHLRC2Q8NBF2 726 aa17.18■□□□□ 0.34
VEGFA-220ENST00000519767 C11orf21Q9P2W6 132 aa17.18■□□□□ 0.34
VEGFA-220ENST00000519767 DNAH5Q8TE73 4624 aa17.17■□□□□ 0.34
VEGFA-220ENST00000519767 GGTLC3B5MD39 225 aa17.17■□□□□ 0.34
VEGFA-220ENST00000519767 PRNTQ86SH4 94 aa17.17■□□□□ 0.34
VEGFA-220ENST00000519767 PRADC1Q9BSG0 188 aa17.17■□□□□ 0.34
VEGFA-220ENST00000519767 TRBV6-4A0A1B0GX49 114 aa17.16■□□□□ 0.34
VEGFA-220ENST00000519767 RS1O15537 224 aa17.16■□□□□ 0.34
VEGFA-220ENST00000519767 CFAP126Q5VTH2 177 aa17.16■□□□□ 0.34
VEGFA-220ENST00000519767 LOC100131303A0A0U1RQF7 123 aa17.15■□□□□ 0.34
VEGFA-220ENST00000519767 CRYGDP07320 174 aa17.15■□□□□ 0.34
VEGFA-220ENST00000519767 RPL7L1Q6DKI1 246 aaKnown RBP17.15■□□□□ 0.34
VEGFA-220ENST00000519767 SLC25A29Q8N8R3 303 aa17.15■□□□□ 0.34
VEGFA-220ENST00000519767 C9orf85Q96MD7 179 aa17.15■□□□□ 0.34
VEGFA-220ENST00000519767 PPT1P50897 306 aa17.14■□□□□ 0.33
VEGFA-220ENST00000519767 NKX6-2Q9C056 277 aaPredicted RBP17.14■□□□□ 0.33
VEGFA-220ENST00000519767 SCRT2Q9NQ03 307 aa17.14■□□□□ 0.33
VEGFA-220ENST00000519767 A0A087WTM6 91 aa17.13■□□□□ 0.33
VEGFA-220ENST00000519767 FXYD6-FXYD2A0A087WZ82 144 aa17.13■□□□□ 0.33
VEGFA-220ENST00000519767 IGHV3-38A0A0C4DH36 116 aa17.13■□□□□ 0.33
VEGFA-220ENST00000519767 RNF222A6NCQ9 220 aa17.13■□□□□ 0.33
VEGFA-220ENST00000519767 RHOHQ15669 191 aa17.13■□□□□ 0.33
VEGFA-220ENST00000519767 APOBP04114 4563 aaKnown RBP17.13■□□□□ 0.33
VEGFA-220ENST00000519767 TRAV8-6A0A0B4J262 113 aa17.12■□□□□ 0.33
VEGFA-220ENST00000519767 CTXND1A0A1B0GTU2 59 aa17.12■□□□□ 0.33
VEGFA-220ENST00000519767 IFNA7P01567 189 aa17.12■□□□□ 0.33
VEGFA-220ENST00000519767 OR2T35Q8NGX2 323 aa17.12■□□□□ 0.33
VEGFA-220ENST00000519767 FABP5P3A8MUU1 101 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms