RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 MAP1LC3AQ9H492 121 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 LAMTOR2Q9Y2Q5 125 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 SYS1-DBNDD2H3BUS1 97 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 H3BVH4 76 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 SNAI2O43623 268 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 NPYP01303 97 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 HIST2H2BCQ6DN03 193 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 ATOH7Q8N100 152 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 RNF185Q96GF1 192 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 FAM19A4Q96LR4 140 aa6.36□□□□□ -1.39
HMGB4-203ENST00000519684 SVEP1Q4LDE5 3571 aa6.35□□□□□ -1.39
HMGB4-203ENST00000519684 TCF21O43680 179 aa6.35□□□□□ -1.39
HMGB4-203ENST00000519684 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
HMGB4-203ENST00000519684 PET117Q6UWS5 81 aa6.35□□□□□ -1.39
HMGB4-203ENST00000519684 LINC00173Q6ZV60 143 aa6.35□□□□□ -1.39
HMGB4-203ENST00000519684 IGHV4-4A0A075B6R2 117 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 TRAV9-2A0A087WT02 112 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 CRXO43186 299 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-203ENST00000519684 CIDEAO60543 219 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 ZNF688P0C7X2 276 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 LEPP41159 167 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 LBHQ53QV2 105 aaPredicted RBP6.34□□□□□ -1.39
HMGB4-203ENST00000519684 KHDC1LQ5JSQ8 128 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 Q6ZQT7 251 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 APRG1Q8IVJ8 170 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 LRRK2Q5S007 2527 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 OR4C46A6NHA9 309 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 H0Y8G0 127 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 ANXA2RQ3ZCQ2 193 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 DPF1Q92782 380 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 UQCR10Q9UDW1 63 aa6.34□□□□□ -1.39
HMGB4-203ENST00000519684 LINC01619G3V211 115 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 K7EQG2 157 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 M0R143 59 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 HBDP02042 147 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 EVI2AP22794 236 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 C4orf3Q8WVX3 66 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
HMGB4-203ENST00000519684 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 ZFHX3Q15911 3703 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 HSBP1L1C9JCN9 74 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 FAM159AQ6UWV7 190 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 SPATA12Q7Z6I5 190 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
HMGB4-203ENST00000519684 ODF3Q96PU9 254 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 ZNF747Q9BV97 191 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 PEMTQ9UBM1 199 aa6.33□□□□□ -1.4
HMGB4-203ENST00000519684 KLLNB2CW77 178 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 M0R381 172 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 DUSP14O95147 198 aaKnown RBP6.32□□□□□ -1.4
HMGB4-203ENST00000519684 SLURP1P55000 103 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 TCTEX1D4Q5JR98 221 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 MRAP2Q96G30 205 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 A0A0J9YX75 114 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 C7orf71A4D174 169 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 TSPOP30536 169 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 DEFB136Q30KP8 78 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 Q6ZN92 141 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 OR1N2Q8NGR9 330 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 FOXC2Q99958 501 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 C2orf88Q9BSF0 95 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 YAE1D1Q9NRH1 226 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 MAP1AP78559 2803 aaPredicted RBP6.32□□□□□ -1.4
HMGB4-203ENST00000519684 CSPG4Q6UVK1 2322 aa6.32□□□□□ -1.4
HMGB4-203ENST00000519684 POLQO75417 2590 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 EREGO14944 169 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 CD5LO43866 347 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 G0S2P27469 103 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
HMGB4-203ENST00000519684 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 KIR3DS1Q14943 382 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 C18orf65Q6ZTR6 163 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 KLHL30-AS1Q8NEE0 82 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 OR11H1Q8NG94 326 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 A0A096LNJ9 63 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 TRAV12-3A0A0B4J271 114 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 GNRH2O43555 120 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 IGKV3-20P01619 116 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 GATA1P15976 413 aaPredicted RBP6.31□□□□□ -1.4
HMGB4-203ENST00000519684 LINC01545Q5VT33 79 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 FOXI2Q6ZQN5 318 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 Q6ZSV7 163 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 Q8N8P6 123 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 DYNLRB2Q8TF09 96 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 AP1S3Q96PC3 154 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 SNHG12Q9BXW3 62 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 ST20Q9HBF5 79 aa6.31□□□□□ -1.4
HMGB4-203ENST00000519684 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 LINC01546A6NGU7 62 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 IGLL1P15814 213 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 OR9G4Q8NGQ1 327 aa6.3□□□□□ -1.4
HMGB4-203ENST00000519684 SCRT2Q9NQ03 307 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms