RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 HOXB4P17483 251 aaPredicted RBP6.59□□□□□ -1.36
TRPS1-209ENST00000519674 EDA2RQ9HAV5 297 aa6.59□□□□□ -1.36
TRPS1-209ENST00000519674 MRPL35Q9NZE8 188 aaKnown RBP6.59□□□□□ -1.36
TRPS1-209ENST00000519674 PLXNB1O43157 2135 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 CHD8Q9HCK8 2581 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 TRAV2A0A0B4J234 112 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 TRAV8-4A0A0B4J246 113 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 E7EQL1 145 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 TIMM23O14925 209 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 UQCRQO14949 82 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 C2orf83Q53S99 150 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 TMEM200BQ69YZ2 307 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 NDUFA11Q86Y39 141 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 POM121L12Q8N7R1 296 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 LINC00526Q96FQ7 95 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 MRPL20Q9BYC9 149 aaKnown RBP6.58□□□□□ -1.36
TRPS1-209ENST00000519674 AAMDCQ9H7C9 122 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 CSMD1Q96PZ7 3565 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 TRBV6-1A0A0K0K1D8 114 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 LGALS1P09382 135 aaKnown RBP6.58□□□□□ -1.36
TRPS1-209ENST00000519674 LEPP41159 167 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 CD69Q07108 199 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 MLANAQ16655 118 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 CTSZQ9UBR2 303 aa6.58□□□□□ -1.36
TRPS1-209ENST00000519674 NCOR2Q9Y618 2525 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 NDUFB3O43676 98 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 SAA1P0DJI8 122 aaPredicted RBP6.57□□□□□ -1.36
TRPS1-209ENST00000519674 EMP1P54849 157 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 ZNF672Q499Z4 452 aaPredicted RBP6.57□□□□□ -1.36
TRPS1-209ENST00000519674 Q71RC1 249 aaPredicted RBP6.57□□□□□ -1.36
TRPS1-209ENST00000519674 ABCA1O95477 2261 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.57□□□□□ -1.36
TRPS1-209ENST00000519674 EBI3Q14213 229 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 TMEM30BQ3MIR4 351 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 ZNF833PQ6ZTB9 187 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 NTN5Q8WTR8 489 aaPredicted RBP6.57□□□□□ -1.36
TRPS1-209ENST00000519674 MALRD1Q5VYJ5 2156 aa6.57□□□□□ -1.36
TRPS1-209ENST00000519674 UPK2O00526 184 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 PLAUP00749 431 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 CRYGBP07316 175 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 PLNP26678 52 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
TRPS1-209ENST00000519674 PRCDQ00LT1 54 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 LINC01560Q8TB33 94 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 VKORC1Q9BQB6 163 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 FAM240AA0A1B0GVK7 77 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 LGALS9O00182 355 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
TRPS1-209ENST00000519674 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 C10orf126Q8N4M7 172 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 TIMD4Q96H15 378 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 ASCL2Q99929 193 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 SPANXDQ9BXN6 97 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 SPTBN1Q01082 2364 aaKnown RBP6.56□□□□□ -1.36
TRPS1-209ENST00000519674 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 LOXP28300 417 aaPredicted RBP6.56□□□□□ -1.36
TRPS1-209ENST00000519674 CKS2P33552 79 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 Q9H3A6 140 aa6.56□□□□□ -1.36
TRPS1-209ENST00000519674 KLK5Q9Y337 293 aaPredicted RBP6.56□□□□□ -1.36
TRPS1-209ENST00000519674 LYNX1G3V0Z9 82 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 CD3EP07766 207 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 LYNX1P0DP58 116 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
TRPS1-209ENST00000519674 EFNA4P52798 201 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 DLX1P56177 255 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 TRPT1Q86TN4 253 aaKnown RBP6.55□□□□□ -1.36
TRPS1-209ENST00000519674 HRNRQ86YZ3 2850 aaPredicted RBP6.55□□□□□ -1.36
TRPS1-209ENST00000519674 TEX49A0A1B0GTD5 131 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 PRB3Q04118 309 aaPredicted RBP6.55□□□□□ -1.36
TRPS1-209ENST00000519674 FLYWCH2Q96CP2 140 aaKnown RBP6.55□□□□□ -1.36
TRPS1-209ENST00000519674 NXT2Q9NPJ8 142 aaKnown RBP6.55□□□□□ -1.36
TRPS1-209ENST00000519674 MSRB2Q9Y3D2 182 aa6.55□□□□□ -1.36
TRPS1-209ENST00000519674 FAM236AA0A1B0GUQ0 79 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 GP9P14770 177 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 TMEM155Q4W5P6 130 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 TMEM190Q8WZ59 177 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 ASH1LQ9NR48 2969 aaKnown RBP6.54□□□□□ -1.36
TRPS1-209ENST00000519674 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 E7EUB6 86 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 LYZL1Q6UWQ5 148 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 OR4C13Q8NGP0 309 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 IGFBPL1Q8WX77 278 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 SVEP1Q4LDE5 3571 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 TRGV11A0A075B6L2 103 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 CRYGDP07320 174 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 CFC1P0CG37 223 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 CRIP1P50238 77 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 DUX3Q96PT4 197 aa6.54□□□□□ -1.36
TRPS1-209ENST00000519674 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
TRPS1-209ENST00000519674 IGHV3-72A0A0B4J1Y9 119 aa6.53□□□□□ -1.36
TRPS1-209ENST00000519674 CCL21O00585 134 aa6.53□□□□□ -1.36
TRPS1-209ENST00000519674 MRPS12O15235 138 aaKnown RBP6.53□□□□□ -1.36
TRPS1-209ENST00000519674 IGHV1-8P0DP01 117 aa6.53□□□□□ -1.36
TRPS1-209ENST00000519674 CRYGAP11844 174 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms