RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 IGHV1-18A0A0C4DH31 117 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 H7C2G1 150 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 CNTFRP26992 372 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 CFHR4Q92496 578 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 SPRR3Q9UBC9 169 aa10.4□□□□□ -0.74
PABPC1-208ENST00000519004 IGHV3-72A0A0B4J1Y9 119 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 IGHG3P01860 377 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 CRYGBP07316 175 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 CEMP1Q6PRD7 247 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-208ENST00000519004 ZNF474Q6S9Z5 364 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-208ENST00000519004 DKK4Q9UBT3 224 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 TRGV11A0A075B6L2 103 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 EMP1P54849 157 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 AMELXQ99217 191 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 DEFB127Q9H1M4 99 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
PABPC1-208ENST00000519004 IGLV4-69A0A075B6H9 119 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 A0A0B4J2C4 111 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 IGKV3D-20A0A0C4DH25 116 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 ENSAO43768 121 aaKnown RBP10.38□□□□□ -0.75
PABPC1-208ENST00000519004 CRYGDP07320 174 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 ADIPOQQ15848 244 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 ZNF318Q5VUA4 2279 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 K7EIM0 57 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 CD3EP07766 207 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 C2orf66Q6UXQ4 117 aa10.38□□□□□ -0.75
PABPC1-208ENST00000519004 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-208ENST00000519004 CFAP47Q6ZTR5 3102 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 HERVK_113P61574 105 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 TEX36Q5VZQ5 186 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 C2orf82Q6UX34 121 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 C11orf21Q9P2W6 132 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 UQCRQO14949 82 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 PMVKQ15126 192 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
PABPC1-208ENST00000519004 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
PABPC1-208ENST00000519004 SAP25Q8TEE9 199 aa10.36□□□□□ -0.75
PABPC1-208ENST00000519004 H7C423 109 aa10.36□□□□□ -0.75
PABPC1-208ENST00000519004 GATA4P43694 442 aa10.36□□□□□ -0.75
PABPC1-208ENST00000519004 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
PABPC1-208ENST00000519004 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
PABPC1-208ENST00000519004 TRIAP1O43715 76 aa10.35□□□□□ -0.75
PABPC1-208ENST00000519004 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
PABPC1-208ENST00000519004 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
PABPC1-208ENST00000519004 Q1RN00 199 aa10.35□□□□□ -0.75
PABPC1-208ENST00000519004 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
PABPC1-208ENST00000519004 IMUPQ9GZP8 106 aa10.35□□□□□ -0.75
PABPC1-208ENST00000519004 BEX4Q9NWD9 120 aaPredicted RBP10.35□□□□□ -0.75
PABPC1-208ENST00000519004 KIAA0100Q14667 2235 aaKnown RBP10.35□□□□□ -0.75
PABPC1-208ENST00000519004 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
PABPC1-208ENST00000519004 TMEM200BQ69YZ2 307 aa10.34□□□□□ -0.75
PABPC1-208ENST00000519004 C1orf162Q8NEQ5 155 aaPredicted RBP10.34□□□□□ -0.75
PABPC1-208ENST00000519004 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
PABPC1-208ENST00000519004 TRBV30A0A0K0K1B3 111 aa10.34□□□□□ -0.75
PABPC1-208ENST00000519004 H3BT86 120 aa10.34□□□□□ -0.75
PABPC1-208ENST00000519004 RPS28P62857 69 aaKnown RBP10.34□□□□□ -0.75
PABPC1-208ENST00000519004 OR13C6PQ8NH95 151 aa10.34□□□□□ -0.75
PABPC1-208ENST00000519004 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 TRGV5A0A0B4J1U4 118 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 TSHBP01222 138 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 CNEP1R1Q8N9A8 125 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 SMAD5-AS1Q9Y6J3 95 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 PRAC2D3DTV9 90 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 CD59P13987 128 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 TMEM219Q86XT9 240 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 MUSTN1Q8IVN3 82 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 C8orf31Q8N9H6 132 aa10.33□□□□□ -0.76
PABPC1-208ENST00000519004 PAPPA-AS1Q5QFB9 102 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 RPL39LQ96EH5 51 aaKnown RBP10.32□□□□□ -0.76
PABPC1-208ENST00000519004 METTL26Q96S19 204 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 S4R3C0 116 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 J3QQQ9 107 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 NTN3O00634 580 aaPredicted RBP10.32□□□□□ -0.76
PABPC1-208ENST00000519004 PMS2CLQ68D20 193 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 IGFBPL1Q8WX77 278 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 LINC00527Q9UJ94 153 aa10.32□□□□□ -0.76
PABPC1-208ENST00000519004 A0A0G2JNJ9 132 aa10.31□□□□□ -0.76
PABPC1-208ENST00000519004 B9A039 149 aa10.31□□□□□ -0.76
PABPC1-208ENST00000519004 TNFAIP6P98066 277 aaPredicted RBP10.31□□□□□ -0.76
PABPC1-208ENST00000519004 SPANXN1Q5VSR9 72 aa10.31□□□□□ -0.76
PABPC1-208ENST00000519004 Q9UFV3 132 aa10.31□□□□□ -0.76
PABPC1-208ENST00000519004 C17orf100A8MU93 164 aa10.31□□□□□ -0.76
PABPC1-208ENST00000519004 GFRALQ6UXV0 394 aa10.31□□□□□ -0.76
PABPC1-208ENST00000519004 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.3□□□□□ -0.76
PABPC1-208ENST00000519004 IGHV1-46P01743 117 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 ZNRF2Q8NHG8 242 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 ZNF883P0CG24 379 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 320.4 ms