RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZNF878C9JN71 531 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 C15orf65H3BRN8 121 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 SLC22A1O15245 554 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 GSTZ1O43708 216 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 SYNGR2O43760 224 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 SLC25A20O43772 301 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 CXCL2P19875 107 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR10J1P30954 320 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 S100A3P33764 101 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 TCL1AP56279 114 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 TAS2R41P59536 307 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 TAS2R45P59539 299 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 AP3S2P59780 193 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 KRTAP10-8P60410 259 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 CDC42P60953 191 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 NAA20P61599 178 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 HERVK_113P63121 156 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 TSPAN31Q12999 210 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 INSL4Q14641 139 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 PRR9Q5T870 116 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR1P1Q8NH06 330 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 ASB17Q8WXJ9 295 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 ANP32BQ92688 251 aaKnown RBP2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 TBX5Q99593 518 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 MND1Q9BWT6 205 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 PARD6GQ9BYG4 376 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 NMNAT1Q9HAN9 279 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 BCL2L10Q9HD36 194 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 TVP23BQ9NYZ1 205 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 PRO0461Q9UI25 63 aa2.61□□□□□ -1.99
HMGB1P23-201ENST00000518743 A0A0J9YY99 117 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 A0A1B0GW54 56 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 C9JCJ5 164 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR2H2O95918 312 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 APOC1P02654 83 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 CD14P08571 375 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 TSPAN19P0C672 248 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 PPP1CCP36873 323 aaKnown RBP2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 RSU1Q15404 277 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 TMEM136Q6ZRR5 245 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 MSRB3Q8IXL7 192 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 C1orf158Q8N1D5 194 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 DNAJC15Q9Y5T4 150 aa2.6□□□□□ -1.99
HMGB1P23-201ENST00000518743 DHRS12A0PJE2 317 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 GRIFINA4D1Z8 144 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 SMIM9A6NGZ8 99 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 KNCNA6PVL3 124 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 MRASO14807 208 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 IGKV1D-12P01611 117 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR5G3P0C626 314 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 IGHV3-30-3P0DP02 117 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 MAGEA12P43365 314 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 ATP5G3P48201 142 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 DHRS2Q13268 280 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 OR2F1Q13607 317 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 SLC25A26Q70HW3 274 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 LINC00311Q8N616 119 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 ZFAND2AQ8N6M9 145 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 CMTM2Q8TAZ6 248 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 AMELYQ99218 206 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 HIGD2AQ9BW72 106 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 TSSK6Q9BXA6 273 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 TPT1P8Q9HAU6 139 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 LY96Q9Y6Y9 160 aa2.59□□□□□ -1.99
HMGB1P23-201ENST00000518743 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 TRAV5A0A0B4J249 113 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 PQLC2LA1A4F0 135 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 GGTLC3B5MD39 225 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 LECT2O14960 151 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 CYB5AP00167 134 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 CTXN2P0C2S0 81 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 CRYGAP11844 174 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 CD36P16671 472 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 CDK6Q00534 326 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 CAV1Q03135 178 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 JOSD1Q15040 202 aaPredicted RBP2.58□□□□□ -2
HMGB1P23-201ENST00000518743 KRTAP13-2Q52LG2 175 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 Q8IYB0 196 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 EIF4E3Q8N5X7 224 aaKnown RBP2.58□□□□□ -2
HMGB1P23-201ENST00000518743 OR4C16Q8NGL9 310 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 DIRAS2Q96HU8 199 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 TMEM109Q9BVC6 243 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 RABAC1Q9UI14 185 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 IER3IP1Q9Y5U9 82 aa2.58□□□□□ -2
HMGB1P23-201ENST00000518743 IGKV1-12A0A0C4DH73 117 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 A0A1W2PQL4 384 aaPredicted RBP2.57□□□□□ -2
HMGB1P23-201ENST00000518743 J3QRK9 145 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 M0R2T5 61 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 SULT1B1O43704 296 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 APOMO95445 188 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 CSN2P05814 226 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 ALOX5APP20292 161 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 EVI2AP22794 236 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 SERPINB9P50453 376 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 LINC00313P59037 77 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 KRTAP12-2P59991 146 aa2.57□□□□□ -2
HMGB1P23-201ENST00000518743 MRPL51Q4U2R6 128 aaKnown RBP2.57□□□□□ -2
HMGB1P23-201ENST00000518743 GLT8D1Q68CQ7 371 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms