RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 LINC01560Q8TB33 94 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 NBASA2RRP1 2371 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 IGHV7-81A0A0B4J1V7 117 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 J3KRW8 73 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 CD3EP07766 207 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 LGALS1P09382 135 aaKnown RBP9.47□□□□□ -0.89
PCM1-203ENST00000517545 TRAV8-2A0A0B4J237 113 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 ODF3BA8MYP8 253 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 APOMO95445 188 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
PCM1-203ENST00000517545 PRR30Q53SZ7 412 aaPredicted RBP9.47□□□□□ -0.89
PCM1-203ENST00000517545 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
PCM1-203ENST00000517545 CLPSL1A2RUU4 121 aa9.46□□□□□ -0.89
PCM1-203ENST00000517545 SCGB3A1Q96QR1 104 aa9.46□□□□□ -0.89
PCM1-203ENST00000517545 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
PCM1-203ENST00000517545 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.9
PCM1-203ENST00000517545 IGF1P05019 195 aa9.46□□□□□ -0.9
PCM1-203ENST00000517545 CKS1BP61024 79 aa9.46□□□□□ -0.9
PCM1-203ENST00000517545 TMEM78Q5T7P6 136 aa9.46□□□□□ -0.9
PCM1-203ENST00000517545 PRR9Q5T870 116 aa9.46□□□□□ -0.9
PCM1-203ENST00000517545 ANKHD1Q8IWZ3 2542 aaKnown RBP9.46□□□□□ -0.9
PCM1-203ENST00000517545 ECSCRQ19T08 205 aa9.46□□□□□ -0.9
PCM1-203ENST00000517545 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
PCM1-203ENST00000517545 MRPL16Q9NX20 251 aaKnown RBP9.46□□□□□ -0.9
PCM1-203ENST00000517545 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
PCM1-203ENST00000517545 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
PCM1-203ENST00000517545 PRADC1Q9BSG0 188 aa9.45□□□□□ -0.9
PCM1-203ENST00000517545 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
PCM1-203ENST00000517545 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
PCM1-203ENST00000517545 RAXQ9Y2V3 346 aa9.45□□□□□ -0.9
PCM1-203ENST00000517545 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 FOXI1Q12951 378 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 ZFP2Q6ZN57 461 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 Q8N6K4 173 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 Q8NA96 180 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 SYT8Q8NBV8 401 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 NEXN-AS1Q8NBZ9 246 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 VKORC1Q9BQB6 163 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 PTPRQQ9UMZ3 2332 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 LINC01548A6NM66 108 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 M0R381 172 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
PCM1-203ENST00000517545 FHL3Q13643 280 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 CFAP126Q5VTH2 177 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 VMO1Q7Z5L0 202 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 DEFB104AQ8WTQ1 72 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 PTH2Q96A98 100 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 ATRXP46100 2492 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 TLN1Q9Y490 2541 aaKnown RBP9.44□□□□□ -0.9
PCM1-203ENST00000517545 PRTN3P24158 256 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 SCGB2A2Q13296 93 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 RASL10AQ92737 203 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
PCM1-203ENST00000517545 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 KLHL30-AS1Q8NEE0 82 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 GLMPQ8WWB7 406 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 TOMM6Q96B49 74 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 LOC107984156A0A0G2JMH3 177 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 SUMO2P61956 95 aaKnown RBP9.43□□□□□ -0.9
PCM1-203ENST00000517545 ARL17AQ8IVW1 177 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 BAALCQ8WXS3 180 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 CCDC140Q96MF4 163 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 LINC01619G3V211 115 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 SLC25A16P16260 332 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 PSMB2P49721 201 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 IGF2-ASQ6U949 168 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 Q8N9W7 124 aa9.43□□□□□ -0.9
PCM1-203ENST00000517545 ZNF418Q8TF45 676 aaPredicted RBP9.43□□□□□ -0.9
PCM1-203ENST00000517545 SCGB1D4Q6XE38 83 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 TRAV26-1A0A087WT03 109 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 G3V318 75 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 TSPAN13O95857 204 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 DEFB1P60022 68 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 C2orf66Q6UXQ4 117 aa9.42□□□□□ -0.9
PCM1-203ENST00000517545 C14orf178Q8N769 122 aaPredicted RBP9.42□□□□□ -0.9
PCM1-203ENST00000517545 ATP6V0E1O15342 81 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 MT-ATP8P03928 68 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 EMP1P54849 157 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCM1-203ENST00000517545 ORMDL2Q53FV1 153 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
PCM1-203ENST00000517545 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 TCTEX1D4Q5JR98 221 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 M0R1W7 72 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 HIF1ANQ9NWT6 349 aa9.41□□□□□ -0.9
PCM1-203ENST00000517545 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
PCM1-203ENST00000517545 UBE2D1P51668 147 aa9.4□□□□□ -0.9
PCM1-203ENST00000517545 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
PCM1-203ENST00000517545 MGPP08493 103 aa9.4□□□□□ -0.9
PCM1-203ENST00000517545 COX6B1P14854 86 aa9.4□□□□□ -0.9
PCM1-203ENST00000517545 FAM110DQ8TAY7 271 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms