RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 EDA2RQ9HAV5 297 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 PLECQ15149 4684 aaKnown RBP7.07□□□□□ -1.28
CLN8-202ENST00000517514 A0A0J9YWU9 116 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 ZNF727A8MUV8 499 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 KRBOX1C9JBD0 128 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 TYMSP04818 313 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 ADCYAP1P18509 176 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 RPL19P84098 196 aaKnown RBP7.07□□□□□ -1.28
CLN8-202ENST00000517514 RRN3P1Q2M238 152 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 FAM162BQ5T6X4 162 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 SMIM12Q96EX1 92 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
CLN8-202ENST00000517514 MDFICQ9P1T7 246 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 CELA1Q9UNI1 258 aa7.07□□□□□ -1.28
CLN8-202ENST00000517514 IGHV3-16A0A0C4DH30 117 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 SFTA3P0C7M3 94 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 HTN1P15515 57 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 RPL23P62829 140 aaKnown RBP7.06□□□□□ -1.28
CLN8-202ENST00000517514 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 PRR27Q6MZM9 219 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 UQCC3Q6UW78 93 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 LINC01551Q86U37 167 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 TMEM263Q8WUH6 116 aaKnown RBP7.06□□□□□ -1.28
CLN8-202ENST00000517514 SDF2L1Q9HCN8 221 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 NAGKQ9UJ70 344 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 LY96Q9Y6Y9 160 aa7.06□□□□□ -1.28
CLN8-202ENST00000517514 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 CBY3A6NI87 242 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 M0R036 132 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
CLN8-202ENST00000517514 RNASE3P12724 160 aaKnown RBP7.05□□□□□ -1.28
CLN8-202ENST00000517514 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 SOHLH1Q5JUK2 328 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 DNLZQ5SXM8 178 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 FAM159AQ6UWV7 190 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
CLN8-202ENST00000517514 GSN-AS1Q9NRJ2 163 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 DKK2Q9UBU2 259 aa7.05□□□□□ -1.28
CLN8-202ENST00000517514 GRIFINA4D1Z8 144 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 EMP1P54849 157 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 TCL1AP56279 114 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 TMEM241Q24JQ0 296 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 IBA57Q5T440 356 aaKnown RBP7.04□□□□□ -1.28
CLN8-202ENST00000517514 ZNF493Q6ZR52 646 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 LINC00612Q8N6U2 182 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 ISOC2Q96AB3 205 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 C9orf85Q96MD7 179 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 NAT8Q9UHE5 227 aa7.04□□□□□ -1.28
CLN8-202ENST00000517514 TMSB15BA0A087X1C1 80 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 B4DEV8 164 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 ORM1P02763 201 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 GZMBP10144 247 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 DAZ2Q13117 558 aaKnown RBP7.03□□□□□ -1.28
CLN8-202ENST00000517514 C12orf74Q32Q52 190 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 C10orf91Q5T1B1 145 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 FAM222AQ5U5X8 452 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 FAM231DQ6ZW35 169 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 SLC7A5P1Q8MH63 180 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 KCNS1Q96KK3 526 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 NOP10Q9NPE3 64 aaKnown RBP7.03□□□□□ -1.28
CLN8-202ENST00000517514 DNAH1Q9P2D7 4330 aa7.03□□□□□ -1.28
CLN8-202ENST00000517514 TRGV11A0A075B6L2 103 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 SPINK4O60575 86 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 CXCL1P09341 107 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 Q6ZTI0 123 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 TIMM8BQ9Y5J9 83 aaPredicted RBP7.02□□□□□ -1.29
CLN8-202ENST00000517514 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
CLN8-202ENST00000517514 TMEM189A5PLL7 270 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 P01737 135 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 ARMS2P0C7Q2 107 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 IGLC6P0CF74 106 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 NANOS2P60321 138 aaKnown RBP7.01□□□□□ -1.29
CLN8-202ENST00000517514 ZNF415Q09FC8 603 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 ADIRFQ15847 76 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 POM121L12Q8N7R1 296 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 OR2D3Q8NGH3 330 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
CLN8-202ENST00000517514 OSTCQ9NRP0 149 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 MRPL16Q9NX20 251 aaKnown RBP7.01□□□□□ -1.29
CLN8-202ENST00000517514 V9GYV3 84 aa7.01□□□□□ -1.29
CLN8-202ENST00000517514 CXorf65A6NEN9 183 aa7□□□□□ -1.29
CLN8-202ENST00000517514 LYRM9A8MSI8 78 aa7□□□□□ -1.29
CLN8-202ENST00000517514 SNURFLB1AK76 121 aa7□□□□□ -1.29
CLN8-202ENST00000517514 H3BVH4 76 aa7□□□□□ -1.29
CLN8-202ENST00000517514 SNAI2O43623 268 aa7□□□□□ -1.29
CLN8-202ENST00000517514 ASIPP42127 132 aa7□□□□□ -1.29
CLN8-202ENST00000517514 GTSF1Q8WW33 167 aa7□□□□□ -1.29
CLN8-202ENST00000517514 DAZAP1Q96EP5 407 aaKnown RBP7□□□□□ -1.29
CLN8-202ENST00000517514 SPXQ9BT56 116 aa7□□□□□ -1.29
CLN8-202ENST00000517514 SEC11CQ9BY50 192 aa7□□□□□ -1.29
CLN8-202ENST00000517514 RPP21Q9H633 154 aaKnown RBP7□□□□□ -1.29
CLN8-202ENST00000517514 BIN3Q9NQY0 253 aa7□□□□□ -1.29
CLN8-202ENST00000517514 IL36BQ9NZH7 164 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms