RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 MRPL36Q9P0J6 103 aaKnown RBP8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 TAX1BP3O14907 124 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 SAMD5Q5TGI4 173 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 LOC400499M0QZD8 3231 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 IGLC1P0CG04 106 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 IGFL2Q6UWQ7 119 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 CITED1Q99966 193 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 KAAG1Q9UBP8 84 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 SCRT2Q9NQ03 307 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 BCL6BQ8N143 479 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 TMEM75Q8N9X5 138 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 MBD6Q96DN6 1003 aa8.55□□□□□ -1.04
PCDHGA1-202ENST00000517417 K7EP13 123 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 FAM120AOSQ5T036 256 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 ZNF747Q9BV97 191 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 CGB3P0DN86 165 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 CGB7P0DN87 165 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 NPC2P61916 151 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 GP9P14770 177 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 C17orf77Q96MU5 243 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 XCL2Q9UBD3 114 aa8.54□□□□□ -1.04
PCDHGA1-202ENST00000517417 A0A1B0GXF2 115 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 SIGLEC8Q9NYZ4 499 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 VCYO14598 125 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 MALP21145 153 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 LINC00322Q6ZN03 302 aaPredicted RBP8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 SEM1Q6ZVN7 128 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 FAM104BQ5XKR9 115 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 Q71RC1 249 aaPredicted RBP8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 Q96MF0 132 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 FRYQ5TBA9 3013 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 A0A087WX48 190 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 PLNP26678 52 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 RITA1Q96K30 269 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 PRR25Q96S07 402 aa8.53□□□□□ -1.04
PCDHGA1-202ENST00000517417 HOXA3O43365 443 aaPredicted RBP8.52□□□□□ -1.04
PCDHGA1-202ENST00000517417 IGHV4-39P01824 125 aa8.52□□□□□ -1.04
PCDHGA1-202ENST00000517417 DEFB130BP0DP73 79 aa8.52□□□□□ -1.04
PCDHGA1-202ENST00000517417 DEFB130AP0DP74 79 aa8.52□□□□□ -1.04
PCDHGA1-202ENST00000517417 TMEM14CQ9P0S9 112 aa8.52□□□□□ -1.04
PCDHGA1-202ENST00000517417 KLF12Q9Y4X4 402 aa8.52□□□□□ -1.04
PCDHGA1-202ENST00000517417 ABCA12Q86UK0 2595 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 PAX2Q02962 417 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 LINC01545Q5VT33 79 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 ZNF479Q96JC4 524 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 IGKV1D-37A0A075B6S9 117 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 TRAV12-2A0A075B6T6 113 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 RBX1P62877 108 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 ZNF491Q8N8L2 437 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 SMPXQ9UHP9 88 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 KLK9Q9UKQ9 250 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 HLA-DMBP28068 263 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 TTC32Q5I0X7 151 aa8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 C11orf68Q9H3H3 251 aaKnown RBP8.52□□□□□ -1.05
PCDHGA1-202ENST00000517417 LGALS9BQ3B8N2 356 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 K7EP34 96 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 C1orf122Q6ZSJ8 110 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 VGLL1Q99990 258 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 GATA3P23771 443 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 TMEM190Q8WZ59 177 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 CFAP47Q6ZTR5 3102 aa8.51□□□□□ -1.05
PCDHGA1-202ENST00000517417 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 DMXL1Q9Y485 3027 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 H3BRN7 92 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 SPATA12Q7Z6I5 190 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 IGLV2-23P01705 113 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 LINC00158P58513 81 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 SPXQ9BT56 116 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
PCDHGA1-202ENST00000517417 NPYP01303 97 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 MTURNQ8N3F0 131 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 TNRC6BQ9UPQ9 1833 aaKnown RBP8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 INS-IGF2F8WCM5 200 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 INSP01308 110 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 PRB1P04280 392 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 LAMA5O15230 3695 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 F6UB75 175 aa8.49□□□□□ -1.05
PCDHGA1-202ENST00000517417 TRAV8-2A0A0B4J237 113 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 PRADC1Q9BSG0 188 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 DKK2Q9UBU2 259 aa8.48□□□□□ -1.05
PCDHGA1-202ENST00000517417 SPRY2O43597 315 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms