RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 IBA57Q5T440 356 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 FAM159AQ6UWV7 190 aa8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 Q6ZQT7 251 aa8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 OR11H2Q8NH07 326 aa8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 ISOC2Q96AB3 205 aa8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 LINC01587Q99440 93 aa8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 ZMAT4Q9H898 229 aa8.65□□□□□ -1.02
PDLIM5-220ENST00000514830 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 IGKV3D-20A0A0C4DH25 116 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 KRBOX1C9JBD0 128 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 F8W036 122 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 RRN3P1Q2M238 152 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 Q8NAQ8 132 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 TMEM263Q8WUH6 116 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 DAZAP1Q96EP5 407 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 C11orf68Q9H3H3 251 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 OSTCQ9NRP0 149 aa8.64□□□□□ -1.03
PDLIM5-220ENST00000514830 STAB2Q8WWQ8 2551 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 TMEM189A5PLL7 270 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 P01737 135 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 RPS20P60866 119 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 OR5I1Q13606 314 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 CT83Q5H943 113 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 PRR27Q6MZM9 219 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 C11orf72Q8NBR9 251 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 NUDT10Q8NFP7 164 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 NUDT11Q96G61 164 aa8.63□□□□□ -1.03
PDLIM5-220ENST00000514830 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 B4DEV8 164 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 ORM1P02763 201 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 TYMSP04818 313 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 ADIRFQ15847 76 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 MUC21Q5SSG8 566 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 SLC7A5P1Q8MH63 180 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 IL17DQ8TAD2 202 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 SFRP2Q96HF1 295 aa8.62□□□□□ -1.03
PDLIM5-220ENST00000514830 DNAH9Q9NYC9 4486 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 IGHV3-16A0A0C4DH30 117 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 XKRY2A2RUG3 117 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 CBY3A6NI87 242 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 AZU1P20160 251 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 TCL1AP56279 114 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 ERVFC1-1P60608 527 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 C15orf54Q8N8G6 183 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 PTH2Q96A98 100 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 RNASE7Q9H1E1 156 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 RPP21Q9H633 154 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 RETNQ9HD89 108 aa8.61□□□□□ -1.03
PDLIM5-220ENST00000514830 IGHV4-28A0A0C4DH34 117 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 PPP1R2P9O14990 202 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 OR2D3Q8NGH3 330 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 C9orf85Q96MD7 179 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 SPXQ9BT56 116 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 GFRA4Q9GZZ7 299 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 NAGKQ9UJ70 344 aa8.6□□□□□ -1.03
PDLIM5-220ENST00000514830 MUC4Q99102 2169 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 A8MWL6 223 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 M0R036 132 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 GNRH2O43555 120 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 SNAI2O43623 268 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 GATCO43716 136 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 ASIPP42127 132 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 FOXA3P55318 350 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 LGALS9BQ3B8N2 356 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 OR10G8Q8NGN5 311 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 ANAPC16Q96DE5 110 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 V9GYV3 84 aa8.59□□□□□ -1.03
PDLIM5-220ENST00000514830 A0A1W2PPQ1 181 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 MT-ND4LP03901 98 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 PRM2P04554 102 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 HTN1P15515 57 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 RPL19P84098 196 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 SVBPQ8N300 66 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 LINC00612Q8N6U2 182 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 MDFICQ9P1T7 246 aa8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-220ENST00000514830 A0A087WWC5 75 aa8.57□□□□□ -1.04
PDLIM5-220ENST00000514830 SNURFLB1AK76 121 aa8.57□□□□□ -1.04
PDLIM5-220ENST00000514830 F2Z2F3 143 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms