RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 ARL14EPLP0DKL9 152 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 IGLC2P0DOY2 106 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 HIST1H1EP10412 219 aaKnown RBP7.01□□□□□ -1.29
NEDD9-215ENST00000514660 RPL7P18124 248 aaKnown RBP7.01□□□□□ -1.29
NEDD9-215ENST00000514660 GCHFRP30047 84 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 TAS2R45P59539 299 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 TAS2R60P59551 318 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 WFDC2Q14508 124 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 ODF1Q14990 250 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 PQLC2Q6ZP29 291 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 NFE4Q86UQ8 179 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 BPIFA4PQ86YQ2 179 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 LRRC20Q8TCA0 184 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 C16orf74Q96GX8 76 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 MAP1LC3BQ9GZQ8 125 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 MSRB1Q9NZV6 116 aa7.01□□□□□ -1.29
NEDD9-215ENST00000514660 H3BTX0 84 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 OR7C2O60412 319 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 NDUFB4O95168 129 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 CXorf1O96002 111 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 NBEAP1P0C6P0 100 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 LINC01620Q4KN68 170 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 KHDC3LQ587J8 217 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 WFDC10BQ8IUB3 73 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 Q8N814 137 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 NTN5Q8WTR8 489 aaPredicted RBP7□□□□□ -1.29
NEDD9-215ENST00000514660 GPR82Q96P67 336 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 MRPL18Q9H0U6 180 aaKnown RBP7□□□□□ -1.29
NEDD9-215ENST00000514660 RNF24Q9Y225 148 aa7□□□□□ -1.29
NEDD9-215ENST00000514660 TRBV19A0A075B6N1 114 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 A0A087X0K7 114 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 NPIPB6E9PJ23 425 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 GALR1P47211 349 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 LYPD5Q6UWN5 251 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 Q6ZTI0 123 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 RNF182Q8N6D2 247 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 OR10J6PQ8NGY7 276 aa6.99□□□□□ -1.29
NEDD9-215ENST00000514660 DAZAP1Q96EP5 407 aaKnown RBP6.99□□□□□ -1.29
NEDD9-215ENST00000514660 SLC17A3O00476 420 aa6.98□□□□□ -1.29
NEDD9-215ENST00000514660 CLLU1Q5K131 121 aa6.98□□□□□ -1.29
NEDD9-215ENST00000514660 TMEM263Q8WUH6 116 aaKnown RBP6.98□□□□□ -1.29
NEDD9-215ENST00000514660 BLNKQ8WV28 456 aa6.98□□□□□ -1.29
NEDD9-215ENST00000514660 LINC00467Q9BRT7 94 aa6.98□□□□□ -1.29
NEDD9-215ENST00000514660 TEX46H3BTG2 121 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 RAB14P61106 215 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 RANP62826 216 aaKnown RBP6.97□□□□□ -1.29
NEDD9-215ENST00000514660 UBE2L3P68036 154 aaKnown RBP6.97□□□□□ -1.29
NEDD9-215ENST00000514660 GUK1Q16774 197 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 ZNF493Q6ZR52 646 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 IQCF2Q8IXL9 164 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 C16orf92Q96LL3 132 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-215ENST00000514660 TMEM167BQ9NRX6 74 aa6.97□□□□□ -1.29
NEDD9-215ENST00000514660 FAM74A7A6NL05 159 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 PAGE4O60829 102 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 ZNF253O75346 499 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 GAS8-AS1O95177 125 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 UBE2G2P60604 165 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 EXOC3-AS1Q8N2X6 119 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 LY96Q9Y6Y9 160 aa6.96□□□□□ -1.3
NEDD9-215ENST00000514660 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 PGPA6NDG6 321 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 DUSP14O95147 198 aaKnown RBP6.95□□□□□ -1.3
NEDD9-215ENST00000514660 MEOX2P50222 304 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
NEDD9-215ENST00000514660 PDE6HQ13956 83 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 CCDC28AQ8IWP9 274 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 TMEM256Q8N2U0 113 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 GNG13Q9P2W3 67 aa6.95□□□□□ -1.3
NEDD9-215ENST00000514660 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 PRAC2D3DTV9 90 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 M0R3E3 92 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 ZNF324O75467 553 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-215ENST00000514660 PPT1P50897 306 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
NEDD9-215ENST00000514660 PSG3Q16557 428 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 SLC50A1Q9BRV3 221 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
NEDD9-215ENST00000514660 LINC00862A6NCI5 91 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 C9JQL5 133 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 BCL2P10415 239 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 HIST1H1AQ02539 215 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-215ENST00000514660 ZNF506Q5JVG8 444 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 OR8A1Q8NGG7 326 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 FAM210AQ96ND0 272 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 MANBALQ9NQG1 85 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 MED9Q9NWA0 146 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 ARL2-SNX15V9GYD0 113 aa6.93□□□□□ -1.3
NEDD9-215ENST00000514660 H7BYZ3 331 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 GNG5P63218 68 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 GFI1BQ5VTD9 330 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 RPUSD4Q96CM3 377 aaKnown RBP6.92□□□□□ -1.3
NEDD9-215ENST00000514660 NKX6-2Q9C056 277 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-215ENST00000514660 AAMDCQ9H7C9 122 aa6.92□□□□□ -1.3
NEDD9-215ENST00000514660 VAX2Q9UIW0 290 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms