RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ASH1LQ9NR48 2969 aaKnown RBP5.42□□□□□ -1.54
NIPBL-208ENST00000514335 IGHV5-51A0A0C4DH38 117 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 ZNF329Q86UD4 541 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 MORN4Q8NDC4 146 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 NUP37Q8NFH4 326 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 PFN4Q8NHR9 129 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 MAST4O15021 2626 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 MYOFQ9NZM1 2061 aa5.42□□□□□ -1.54
NIPBL-208ENST00000514335 MRPS36P82909 103 aaKnown RBP5.41□□□□□ -1.54
NIPBL-208ENST00000514335 Q6ZVQ6 151 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 TRBV7-3A0A075B6L6 115 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 UBE2L6O14933 153 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 IGKV1D-33P01593 117 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 IGKV1-33P01594 117 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 ZNF138P52744 262 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 REG3AQ06141 175 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 Q6ZSV7 163 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 WFDC6Q9BQY6 131 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 WDFY4Q6ZS81 3184 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 KIF26BQ2KJY2 2108 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 IGKV1-9A0A0C4DH69 117 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 FRG2Q64ET8 278 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 Q6ZR03 302 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 LCA10Q71F78 164 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 LYZL2Q7Z4W2 148 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 FRG2BQ96QU4 278 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 SLC25A22Q9H936 323 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 Q9UFV3 132 aa5.41□□□□□ -1.54
NIPBL-208ENST00000514335 FLNBO75369 2602 aaKnown RBP5.4□□□□□ -1.54
NIPBL-208ENST00000514335 COX7A2LO14548 114 aa5.4□□□□□ -1.54
NIPBL-208ENST00000514335 C5orf42Q9H799 3197 aa5.4□□□□□ -1.54
NIPBL-208ENST00000514335 DNAH12Q6ZR08 3092 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 PRR14LQ5THK1 2151 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 A0A087WZ39 114 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 FAM223BA6NKX1 122 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 FSTL3O95633 263 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 PLA2G2DQ9UNK4 145 aa5.4□□□□□ -1.55
NIPBL-208ENST00000514335 ZNF706Q9Y5V0 76 aaPredicted RBP5.4□□□□□ -1.55
NIPBL-208ENST00000514335 PCNX2A6NKB5 2137 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 FXYD3Q14802 87 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 SLC48A1Q6P1K1 146 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 Q6ZPA2 131 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 KLLNB2CW77 178 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 F5H697 171 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 GYPEP15421 78 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 SMIM11AP58511 58 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 SERF2P84101 59 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 HOXA4Q00056 320 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-208ENST00000514335 MORN5Q5VZ52 161 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 C20orf197Q8N268 126 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 NAV2Q8IVL1 2488 aa5.39□□□□□ -1.55
NIPBL-208ENST00000514335 IGKV1D-17A0A075B6S4 117 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 A8MU10 97 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 BUB1B-PAK6H3BSN5 160 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 XCL1P47992 114 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
NIPBL-208ENST00000514335 CYYR1Q96J86 154 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 XCL2Q9UBD3 114 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 H0Y9J4 135 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 IGKV1-16P04430 117 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 SLC25A2Q9BXI2 301 aa5.38□□□□□ -1.55
NIPBL-208ENST00000514335 SMIM27A0A1W2PRY6 76 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 H3BSH0 61 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 CD24P25063 80 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 RHOHQ15669 191 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 ZNF876PQ49A33 203 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 DEFB121Q5J5C9 76 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 ITLN1Q8WWA0 313 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 ITLN2Q8WWU7 325 aaPredicted RBP5.37□□□□□ -1.55
NIPBL-208ENST00000514335 ABHD14BQ96IU4 210 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 SPTBN2O15020 2390 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 IGLV3-10A0A075B6K4 115 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 HBDP02042 147 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 ACYP1P07311 99 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 HMGA1P17096 107 aaKnown RBP5.37□□□□□ -1.55
NIPBL-208ENST00000514335 UBE2D1P51668 147 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 RBMY1FQ15415 496 aaKnown RBP5.37□□□□□ -1.55
NIPBL-208ENST00000514335 Q75L30 129 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 GCN1Q92616 2671 aaKnown RBP5.37□□□□□ -1.55
NIPBL-208ENST00000514335 CTXND1A0A1B0GTU2 59 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 SCO2A0A1W2PP80 73 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 MFAP2P55001 183 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 MP68P56378 58 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 GPHB5Q86YW7 130 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 MAPKAPK5-AS1Q8N8E1 139 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 RNF185Q96GF1 192 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 CCL13Q99616 98 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 LIME1Q9H400 295 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 CFAP47Q6ZTR5 3102 aa5.37□□□□□ -1.55
NIPBL-208ENST00000514335 CACNA1DQ01668 2161 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 E7EUB6 86 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 CXCL8P10145 99 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 FUSP35637 526 aaKnown RBP eCLIP5.36□□□□□ -1.55
NIPBL-208ENST00000514335 NCBP2P52298 156 aaKnown RBP eCLIP5.36□□□□□ -1.55
NIPBL-208ENST00000514335 SDIM1Q6ZPB5 146 aa5.36□□□□□ -1.55
NIPBL-208ENST00000514335 Q96M85 177 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms