RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 EIF4E3Q8N5X7 224 aaKnown RBP5.84□□□□□ -1.47
NEDD4-210ENST00000513957 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 MBD3L1Q8WWY6 194 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 HIST1H2BAQ96A08 127 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 EPDR1Q9UM22 224 aa5.84□□□□□ -1.47
NEDD4-210ENST00000513957 DEFB131BA0A096LNP1 70 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 TRAV21A0A0B4J279 112 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 FAM74A7A6NL05 159 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 F6UZH7 168 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 PLA2G1BP04054 148 aaKnown RBP5.83□□□□□ -1.48
NEDD4-210ENST00000513957 EMP1P54849 157 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 BTN1A1Q13410 526 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 TDRG1Q3Y452 100 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 ZFP69Q49AA0 526 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 SAPCD1Q5SSQ6 148 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 SSX7Q7RTT5 188 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 LINC00612Q8N6U2 182 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 Q8TAT8 98 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 C18orf15Q96N68 181 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 TP53TG3Q9ULZ0 132 aa5.83□□□□□ -1.48
NEDD4-210ENST00000513957 TENM2Q9NT68 2774 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 IGHV1OR15-1A0A075B7D0 117 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 TRAV1-1A0A0B4J248 108 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 PRYO14603 147 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 EIF3GO75821 320 aaKnown RBP eCLIP5.82□□□□□ -1.48
NEDD4-210ENST00000513957 HTN1P15515 57 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 AZU1P20160 251 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
NEDD4-210ENST00000513957 TCL1AP56279 114 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 FLI1Q01543 452 aaPredicted RBP5.82□□□□□ -1.48
NEDD4-210ENST00000513957 CD300CQ08708 224 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 ZNF415Q09FC8 603 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 LGALS9BQ3B8N2 356 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 LGALS9CQ6DKI2 356 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 FAM159AQ6UWV7 190 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 FAM213BQ8TBF2 198 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 LINC00476Q8WZB0 136 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 KCNS1Q96KK3 526 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 TXNDC17Q9BRA2 123 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 NDUFAF3Q9BU61 184 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 TREM1Q9NP99 234 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 RPH3ALQ9UNE2 315 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 LYSTQ99698 3801 aa5.82□□□□□ -1.48
NEDD4-210ENST00000513957 IGHV4-4A0A075B6R2 117 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 PEX7O00628 323 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 IFNA7P01567 189 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 ATP5G1P05496 136 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 PRB4P10163 310 aaPredicted RBP5.81□□□□□ -1.48
NEDD4-210ENST00000513957 TAGLN2P37802 199 aaKnown RBP5.81□□□□□ -1.48
NEDD4-210ENST00000513957 ATP5G3P48201 142 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 SULT1A2P50226 295 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 FGF8P55075 233 aaPredicted RBP5.81□□□□□ -1.48
NEDD4-210ENST00000513957 GNG5P63218 68 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 PRR9Q5T870 116 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 C9orf62Q8N4C0 152 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 C15orf53Q8NAA6 179 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 C11orf72Q8NBR9 251 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 SFT2D1Q8WV19 159 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 FMC1Q96HJ9 113 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 TPPP3Q9BW30 176 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 MANBALQ9NQG1 85 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 PSG8Q9UQ74 426 aa5.81□□□□□ -1.48
NEDD4-210ENST00000513957 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
NEDD4-210ENST00000513957 TRAV8-1A0A0A6YYK1 113 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 TRBV6-1A0A0K0K1D8 114 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 IGLL5B9A064 214 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 IGLV2-11P01706 119 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 S100A9P06702 114 aaKnown RBP5.8□□□□□ -1.48
NEDD4-210ENST00000513957 PFN1P07737 140 aaKnown RBP5.8□□□□□ -1.48
NEDD4-210ENST00000513957 SMUG1Q53HV7 270 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 COX8CQ7Z4L0 72 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 TMPRSS5Q9H3S3 457 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 NOP10Q9NPE3 64 aaKnown RBP5.8□□□□□ -1.48
NEDD4-210ENST00000513957 APLNQ9ULZ1 77 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 ZFP30Q9Y2G7 519 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 KLF12Q9Y4X4 402 aa5.8□□□□□ -1.48
NEDD4-210ENST00000513957 PLECQ15149 4684 aaKnown RBP5.79□□□□□ -1.48
NEDD4-210ENST00000513957 H3BNG1 76 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 SPINK4O60575 86 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 IFNA1P01562 189 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 P0DMU3 169 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 FAM231AP0DMU4 169 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 FAM231CP0DMU5 169 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 DEFB130BP0DP73 79 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 DEFB130AP0DP74 79 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 UBE2G2P60604 165 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 UBE2G1P62253 170 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 Q86TA4 180 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 SDF2L1Q9HCN8 221 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 GSN-AS1Q9NRJ2 163 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 MUC4Q99102 2169 aa5.79□□□□□ -1.48
NEDD4-210ENST00000513957 F8WDY8 70 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 GCGP01275 180 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 PRM2P04554 102 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 AKR1C3P42330 323 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 SLAQ13239 276 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 TMEM183BQ1AE95 376 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 ZNF767PQ75MW2 155 aa5.78□□□□□ -1.48
NEDD4-210ENST00000513957 PRNTQ86SH4 94 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms