RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 FXYD5Q96DB9 178 aa4.37□□□□□ -1.71
LINC00616-204ENST00000513895 SLC25A22Q9H936 323 aa4.37□□□□□ -1.71
LINC00616-204ENST00000513895 ZNF586Q9NXT0 402 aa4.37□□□□□ -1.71
LINC00616-204ENST00000513895 DNAH7Q8WXX0 4024 aa4.37□□□□□ -1.71
LINC00616-204ENST00000513895 MGAM2Q2M2H8 2515 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 TRAV1-1A0A0B4J248 108 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 IGHV3-38A0A0C4DH36 116 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 SOCS3O14543 225 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 HMGB3O15347 200 aaKnown RBP4.36□□□□□ -1.71
LINC00616-204ENST00000513895 CXorf1O96002 111 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 NBEAP1P0C6P0 100 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 PYYP10082 97 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 GALR1P47211 349 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 TAS2R45P59539 299 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 EGFEM1PQ0D2K5 195 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 KHDC3LQ587J8 217 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 LCN15Q6UWW0 184 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 Q6ZRP5 223 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 LYPD6BQ8NI32 183 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 FAM213BQ8TBF2 198 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 DYNLRB2Q8TF09 96 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 DCANP1Q8TF63 244 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 PAXXQ9BUH6 204 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 MS4A6AQ9H2W1 248 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 RETNQ9HD89 108 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 BIN3Q9NQY0 253 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 ZNF256Q9Y2P7 627 aaPredicted RBP4.36□□□□□ -1.71
LINC00616-204ENST00000513895 NOTCH1P46531 2555 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 MEGF8Q7Z7M0 2845 aa4.36□□□□□ -1.71
LINC00616-204ENST00000513895 NOTCH3Q9UM47 2321 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 TRBV19A0A075B6N1 114 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 A0A087WYN8 130 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 TRAV8-2A0A0B4J237 113 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 MAP1LC3B2A6NCE7 125 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 ZNF705EA8MWA4 302 aaPredicted RBP4.35□□□□□ -1.71
LINC00616-204ENST00000513895 K7EQG2 157 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 SLC17A3O00476 420 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 OR7C2O60412 319 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 ZNF253O75346 499 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 OR10J4P0C629 311 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 ARL14EPLP0DKL9 152 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 GCHFRP30047 84 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 FGF8P55075 233 aaPredicted RBP4.35□□□□□ -1.71
LINC00616-204ENST00000513895 CCL20P78556 96 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 PDE6HQ13956 83 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 GUK1Q16774 197 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 LCN12Q6JVE5 192 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 FAM24BQ8N5W8 94 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 SFT2D1Q8WV19 159 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 MAP1LC3BQ9GZQ8 125 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 ZNF331Q9NQX6 463 aaPredicted RBP4.35□□□□□ -1.71
LINC00616-204ENST00000513895 TMEM167BQ9NRX6 74 aa4.35□□□□□ -1.71
LINC00616-204ENST00000513895 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
LINC00616-204ENST00000513895 IGKV3-7A0A075B6H7 116 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 OR4C46A6NHA9 309 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
LINC00616-204ENST00000513895 ISLRO14498 428 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 HBE1P02100 147 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 NMBP08949 121 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 SNRPCP09234 159 aaKnown RBP4.34□□□□□ -1.71
LINC00616-204ENST00000513895 PSMB3P49720 205 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 UBE2L3P68036 154 aaKnown RBP4.34□□□□□ -1.71
LINC00616-204ENST00000513895 PAFAH1B2P68402 229 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 RNF212Q495C1 297 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 KPRPQ5T749 579 aaPredicted RBP4.34□□□□□ -1.71
LINC00616-204ENST00000513895 SAMD13Q5VXD3 122 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 LYPD1Q8N2G4 141 aa4.34□□□□□ -1.71
LINC00616-204ENST00000513895 LOC100131303A0A0U1RQF7 123 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
LINC00616-204ENST00000513895 HLA-DMBP28068 263 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 TFPI2P48307 235 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 CMC4P56277 68 aaPredicted RBP4.33□□□□□ -1.72
LINC00616-204ENST00000513895 RANP62826 216 aaKnown RBP4.33□□□□□ -1.72
LINC00616-204ENST00000513895 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
LINC00616-204ENST00000513895 PSG9Q00887 426 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 VAMP3Q15836 100 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 PSG3Q16557 428 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 GUCA2BQ16661 112 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 C11orf45Q8TAV5 145 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 BLNKQ8WV28 456 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 ISOC2Q96AB3 205 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 SLC50A1Q9BRV3 221 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 CLEC5AQ9NY25 188 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 YTHDF2Q9Y5A9 579 aaKnown RBP4.33□□□□□ -1.72
LINC00616-204ENST00000513895 ARL2-SNX15V9GYD0 113 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 SORL1Q92673 2214 aa4.33□□□□□ -1.72
LINC00616-204ENST00000513895 A0A1B0GV50 99 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 PGPA6NDG6 321 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 ZNF705FA8MVS1 300 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-204ENST00000513895 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 GGTLC3B5MD39 225 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 E9PLD3 99 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 CD7P09564 240 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 ZNF688P0C7X2 276 aa4.32□□□□□ -1.72
LINC00616-204ENST00000513895 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
LINC00616-204ENST00000513895 LINC01547P58512 204 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms