RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 BRCA1P38398 1863 aaKnown RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 NCKAP5O14513 1909 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 ALPK3Q96L96 1907 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 DOT1LQ8TEK3 1739 aa2.87□□□□□ -1.95
NIPBL-207ENST00000513819 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.87□□□□□ -1.95
NIPBL-207ENST00000513819 TOGARAM1Q9Y4F4 1720 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 TRAV41A0A0B4J266 112 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 UBE2L5PA0A1B0GUS4 154 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 C19orf71A6NCJ1 209 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 PEX7O00628 323 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 NDUFB3O43676 98 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 ACYP1P07311 99 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 SLC25A16P16260 332 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 NCBP2P52298 156 aaKnown RBP eCLIP2.86□□□□□ -1.95
NIPBL-207ENST00000513819 ATP5EP56381 51 aaPredicted RBP2.86□□□□□ -1.95
NIPBL-207ENST00000513819 SMIM11AP58511 58 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 RPL30P62888 115 aaKnown RBP2.86□□□□□ -1.95
NIPBL-207ENST00000513819 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 FAM222AQ5U5X8 452 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 ZFP2Q6ZN57 461 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 SDIM1Q6ZPB5 146 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 LINC00643Q86TS7 51 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 OR8A1Q8NGG7 326 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 ABHD14BQ96IU4 210 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 METTL26Q96S19 204 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 TRGV9Q99603 122 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 NHP2Q9NX24 153 aaKnown RBP2.86□□□□□ -1.95
NIPBL-207ENST00000513819 EPDR1Q9UM22 224 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 KIDINS220Q9ULH0 1771 aa2.86□□□□□ -1.95
NIPBL-207ENST00000513819 IGHV3OR15-7A0A075B7D8 119 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 TRBV6-6A0A0A6YYG2 114 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 MYMXA0A1B0GTQ4 84 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 H3BP45 60 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 PIN1P1O15428 100 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF73O43830 326 aaPredicted RBP2.85□□□□□ -1.95
NIPBL-207ENST00000513819 LEPROTL1O95214 131 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 PPYP01298 95 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 NPYP01303 97 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 IGLV2-23P01705 113 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 LGALS3P17931 250 aaKnown RBP2.85□□□□□ -1.95
NIPBL-207ENST00000513819 HERVK_113P61574 105 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 SUPT4H1P63272 117 aaKnown RBP2.85□□□□□ -1.95
NIPBL-207ENST00000513819 MIC13Q5XKP0 118 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 RPS27LQ71UM5 84 aaKnown RBP2.85□□□□□ -1.95
NIPBL-207ENST00000513819 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 MARCH3Q86UD3 253 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 MORN4Q8NDC4 146 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 OR5C1Q8NGR4 320 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 FXYD5Q96DB9 178 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF492Q9P255 531 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 NUP210Q8TEM1 1887 aaPredicted RBP2.85□□□□□ -1.95
NIPBL-207ENST00000513819 LRRC37A3O60309 1634 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 TICRRQ7Z2Z1 1910 aa2.85□□□□□ -1.95
NIPBL-207ENST00000513819 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.85□□□□□ -1.95
NIPBL-207ENST00000513819 RGPD4Q7Z3J3 1758 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 ARFGEF1Q9Y6D6 1849 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 IGHV3-64DA0A0J9YX35 117 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 IBA57-AS1B1ANH7 110 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 IL4P05112 153 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 CACNG7P62955 275 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 RPL18Q07020 188 aaKnown RBP2.84□□□□□ -1.95
NIPBL-207ENST00000513819 SS18Q15532 418 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 ZNF56Q15929 161 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 ABCA11PQ4W5N1 156 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 FAM104BQ5XKR9 115 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 LCA10Q71F78 164 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 PHF5AQ7RTV0 110 aaKnown RBP2.84□□□□□ -1.95
NIPBL-207ENST00000513819 Q8N8P6 123 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 RNASE6Q93091 150 aaKnown RBP2.84□□□□□ -1.95
NIPBL-207ENST00000513819 FAM3DQ96BQ1 224 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 TXNDC17Q9BRA2 123 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 LINC00588Q9Y4M8 146 aa2.84□□□□□ -1.95
NIPBL-207ENST00000513819 RGPD3A6NKT7 1758 aaPredicted RBP2.84□□□□□ -1.96
NIPBL-207ENST00000513819 COL16A1Q07092 1604 aaPredicted RBP2.83□□□□□ -1.96
NIPBL-207ENST00000513819 RICTORQ6R327 1708 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 LOC285556D6RIA3 1793 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 A8MUN3 132 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 LST1O00453 97 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 FFAR1O14842 300 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 UBE2L6O14933 153 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 SLC25A20O43772 301 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 BGLAPP02818 100 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 S100A3P33764 101 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 PSMB2P49721 201 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 SYNJ2BPP57105 145 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 HBBP68871 147 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 SERF2P84101 59 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 TMEM155Q4W5P6 130 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 PDPNQ86YL7 162 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 TMEM243Q9BU79 118 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 SLC25A2Q9BXI2 301 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 ARHGAP21Q5T5U3 1957 aa2.83□□□□□ -1.96
NIPBL-207ENST00000513819 ITGB4P16144 1822 aa2.82□□□□□ -1.96
NIPBL-207ENST00000513819 NYNRINQ9P2P1 1898 aaKnown RBP2.82□□□□□ -1.96
NIPBL-207ENST00000513819 IGLV1-36A0A0B4J1U3 117 aa2.82□□□□□ -1.96
NIPBL-207ENST00000513819 IGKV1D-43A0A0B4J1Z2 117 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms