RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 KIAA1549Q9HCM3 1950 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 RUSC1-AS1Q66K80 236 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 ADARB2-AS1A8MUL3 147 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 F6UB75 175 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 SLC25A20O43772 301 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 KLHL30-AS1Q8NEE0 82 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 RPL39LQ96EH5 51 aaKnown RBP6.07□□□□□ -1.44
CLCN3-209ENST00000513761 PRSS22Q9GZN4 317 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 KLK9Q9UKQ9 250 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 A0A1W2PNU3 283 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-209ENST00000513761 BPESC1Q9GZL8 116 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 TRGV2A0A075B6R0 118 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 H3BMM0 161 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 KAAG1Q9UBP8 84 aa6.07□□□□□ -1.44
CLCN3-209ENST00000513761 TRAV12-2A0A075B6T6 113 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 GNRH2O43555 120 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 CR1LQ2VPA4 569 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 ZFHX2Q9C0A1 2572 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-209ENST00000513761 A0A1W2PRX2 142 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 PRAC2D3DTV9 90 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 Q8N7P7 452 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 J3QQQ9 107 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 SPINK13Q1W4C9 94 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 TEX22C9J3V5 150 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 C1QTNF4Q9BXJ3 329 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 ODF1Q14990 250 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 C8orf31Q8N9H6 132 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 LY6G5BQ8NDX9 201 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 NTN5Q8WTR8 489 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-209ENST00000513761 MLST8Q9BVC4 326 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 TRAV13-1A0A0B4J241 112 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 FAM223BA6NKX1 122 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 FAM223AQ8IWN6 122 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
CLCN3-209ENST00000513761 DAZ1Q9NQZ3 744 aaKnown RBP6.06□□□□□ -1.44
CLCN3-209ENST00000513761 IGHV3-53P01767 116 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 RNASE13Q5GAN3 156 aaKnown RBP6.05□□□□□ -1.44
CLCN3-209ENST00000513761 C1orf159Q96HA4 380 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 BDP1A6H8Y1 2624 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 LINC00158P58513 81 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 MORN3Q6PF18 240 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-209ENST00000513761 C11orf68Q9H3H3 251 aaKnown RBP6.05□□□□□ -1.44
CLCN3-209ENST00000513761 C11orf44Q8N8P7 122 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 SS18L2Q9UHA2 77 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 SPG11Q96JI7 2443 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 BPTFQ12830 3046 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 B5MCH6 92 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 CGB3P0DN86 165 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 CGB7P0DN87 165 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 SEM1Q6ZVN7 128 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 TRPT1Q86TN4 253 aaKnown RBP6.05□□□□□ -1.44
CLCN3-209ENST00000513761 Q8N976 141 aa6.05□□□□□ -1.44
CLCN3-209ENST00000513761 ATG2AQ2TAZ0 1938 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 GATD1Q8NB37 220 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 C20orf78Q9BR46 151 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 INS-IGF2F8WCM5 200 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 USMG5Q96IX5 58 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 RBMY1BA6NDE4 496 aaKnown RBP6.04□□□□□ -1.44
CLCN3-209ENST00000513761 RBMY1EA6NEQ0 496 aaKnown RBP6.04□□□□□ -1.44
CLCN3-209ENST00000513761 CTSGP08311 255 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 RBMY1DP0C7P1 496 aaKnown RBP6.04□□□□□ -1.44
CLCN3-209ENST00000513761 RBMY1A1P0DJD3 496 aaKnown RBP6.04□□□□□ -1.44
CLCN3-209ENST00000513761 RBMY1CP0DJD4 496 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 UBE2E1P51965 193 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 STHQ8IWL8 128 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 NAV3Q8IVL0 2385 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 SHISA9B4DS77 424 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 IFITM1P13164 125 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 GAGE2AQ6NT46 116 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 PRIMA1Q86XR5 153 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 EDA2RQ9HAV5 297 aa6.04□□□□□ -1.44
CLCN3-209ENST00000513761 IGHV3-16A0A0C4DH30 117 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 CRYGCP07315 174 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 SYNJ2BPP57105 145 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 LY6DQ14210 128 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 PTH2Q96A98 100 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 IGLV11-55A0A075B6I3 123 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 IGFL3Q6UXB1 125 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 ZNF48Q96MX3 618 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-209ENST00000513761 MSRB2Q9Y3D2 182 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 IGHV3-38A0A0C4DH36 116 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 NDUFA12Q9UI09 145 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 TRGV1A0A0A0MS02 117 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-209ENST00000513761 SPRY4Q9C004 299 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 NACAE9PAV3 2078 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 CRPP02741 224 aa6.03□□□□□ -1.44
CLCN3-209ENST00000513761 HIST1H4AP62805 103 aaKnown RBP6.03□□□□□ -1.44
CLCN3-209ENST00000513761 ANKHD1Q8IWZ3 2542 aaKnown RBP6.03□□□□□ -1.44
CLCN3-209ENST00000513761 I3L3M4 83 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 GRNP28799 593 aaKnown RBP6.02□□□□□ -1.45
CLCN3-209ENST00000513761 DEFB1P60022 68 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 PLA2G2CQ5R387 149 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 C15orf53Q8NAA6 179 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 WI2-2373I1.2A0A1W2PRP0 233 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 PAX4O43316 350 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 CFC1BP0CG36 223 aa6.02□□□□□ -1.45
CLCN3-209ENST00000513761 CFC1P0CG37 223 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms