RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 Q6ZTI0 123 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 MIR17HGQ75NE6 70 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 LINC00612Q8N6U2 182 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 ZNRF2Q8NHG8 242 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 TMEM263Q8WUH6 116 aaKnown RBP4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 BLNKQ8WV28 456 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 C16orf74Q96GX8 76 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 FAM210BQ96KR6 192 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 FAM167A-AS1Q96KT0 104 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 SPXQ9BT56 116 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 CCDC32Q9BV29 185 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 SLC25A2Q9BXI2 301 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 NPCDR1Q9BY65 106 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 GPN1Q9HCN4 374 aaPredicted RBP4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 TP53TG3Q9ULZ0 132 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
HMGN1P17-201ENST00000513734 APOBP04114 4563 aaKnown RBP4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 TRBV19A0A075B6N1 114 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 ATP5G1P05496 136 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 OR10J4P0C629 311 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 S100A7P31151 101 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 RPL29P47914 159 aaKnown RBP4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 ATP5G3P48201 142 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 H2BFSP57053 126 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 CLINT1Q14677 625 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 RNF212Q495C1 297 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 TMEM256Q8N2U0 113 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 C15orf53Q8NAA6 179 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 C11orf72Q8NBR9 251 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 OR10J6PQ8NGY7 276 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 Q8TAT8 98 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 FAM19A4Q96LR4 140 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 VGLL1Q99990 258 aa4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 TIMM8BQ9Y5J9 83 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P17-201ENST00000513734 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 NBDYA0A0U1RRE5 68 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 C7orf71A4D174 169 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 KLLNB2CW77 178 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 H7BYZ3 331 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 ZNF324O75467 553 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 UPK1BO75841 260 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 S100A11P31949 105 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 OR5I1Q13606 314 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 Q6ZRG5 221 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 STX12Q86Y82 276 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 ZFAND2AQ8N6M9 145 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 OR5C1Q8NGR4 320 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 OR1L4Q8NGR5 311 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 FXYD5Q96DB9 178 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 PHYHIPLQ96FC7 376 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 PFDN5Q99471 154 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 AGPAT4-IT1Q9H0P7 198 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 TMEM14CQ9P0S9 112 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 KLF12Q9Y4X4 402 aa4.37□□□□□ -1.71
HMGN1P17-201ENST00000513734 ZNF253O75346 499 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 IGHV3-53P01767 116 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 HIST1H1EP10412 219 aaKnown RBP4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 PVALBP20472 110 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 RNASE4P34096 147 aaKnown RBP4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 FUSP35637 526 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 LEPP41159 167 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 HBG1P69891 147 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 HBG2P69892 147 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 CYCSP99999 105 aaKnown RBP4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 ESRGQ1W209 222 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 Q6ZVQ6 151 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 SSX7Q7RTT5 188 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 ENKURQ8TC29 256 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 SMIM3Q9BZL3 60 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 WFDC1Q9HC57 220 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 MRPL16Q9NX20 251 aaKnown RBP4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 NDUFA13Q9P0J0 144 aa4.36□□□□□ -1.71
HMGN1P17-201ENST00000513734 A0A096LPF7 62 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 RLN2P04090 185 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 RAB31Q13636 194 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 GUK1Q16774 197 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 ZNF493Q6ZR52 646 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 S100A7AQ86SG5 101 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 RXFP4Q8TDU9 374 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 PPP1R1CQ8WVI7 109 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 S100ZQ8WXG8 99 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 GNPNAT1Q96EK6 184 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 MRPL53Q96EL3 112 aaKnown RBP4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 NMES1Q9C002 83 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 WDR61Q9GZS3 305 aaKnown RBP4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 TIMM9Q9Y5J7 89 aa4.35□□□□□ -1.71
HMGN1P17-201ENST00000513734 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
HMGN1P17-201ENST00000513734 TRGV1A0A0A0MS02 117 aa4.34□□□□□ -1.71
HMGN1P17-201ENST00000513734 INMT-MINDY4F8WBC2 141 aa4.34□□□□□ -1.71
HMGN1P17-201ENST00000513734 MPDU1O75352 247 aa4.34□□□□□ -1.71
HMGN1P17-201ENST00000513734 SLC25A5P05141 298 aaKnown RBP4.34□□□□□ -1.71
HMGN1P17-201ENST00000513734 NBEAP1P0C6P0 100 aa4.34□□□□□ -1.71
HMGN1P17-201ENST00000513734 CRISP2P16562 243 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms