RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 NBEAP1P0C6P0 100 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 GCSAMLQ5JQS6 135 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 CFAP126Q5VTH2 177 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 PHYHIPLQ96FC7 376 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 FAM167A-AS1Q96KT0 104 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 SH3BGRL3Q9H299 93 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 GSKIPQ9P0R6 139 aa7.07□□□□□ -1.28
DDX41-216ENST00000513562 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 C5orf51A6NDU8 294 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 OR10J4P0C629 311 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 LINC00694P0DN24 101 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 CSN1S1P47710 185 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 CAV2P51636 162 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 BAXQ07812 192 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 DPPA3Q6W0C5 159 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 FXYD5Q96DB9 178 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 DNAJC30Q96LL9 226 aa7.06□□□□□ -1.28
DDX41-216ENST00000513562 IGHV3-73A0A0B4J1V6 119 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 L7N2F9 121 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
DDX41-216ENST00000513562 BCAP31P51572 246 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 VAMP2P63027 116 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 CNPY1Q3B7I2 92 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 ZNF876PQ49A33 203 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 PYDC2Q56P42 97 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 MIR17HGQ75NE6 70 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 TMED6Q8WW62 240 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 ATP5SQ99766 215 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 SLIRPQ9GZT3 109 aaKnown RBP7.05□□□□□ -1.28
DDX41-216ENST00000513562 OR51M1Q9H341 326 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 C11orf1Q9H5F2 150 aa7.05□□□□□ -1.28
DDX41-216ENST00000513562 TRAV21A0A0B4J279 112 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 NDUFB6O95139 128 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 FGF7P21781 194 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 S100A5P33763 92 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 INPP1P49441 399 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 C14orf177Q52M58 125 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 ATRAIDQ6UW56 229 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 NPCDR1Q9BY65 106 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 SDF2L1Q9HCN8 221 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 FLVCR2Q9UPI3 526 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 V9GYH0 126 aa7.04□□□□□ -1.28
DDX41-216ENST00000513562 A0A087WWC5 75 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 GAGE12JA6NER3 117 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 FAM24AA6NFZ4 105 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 DIRC3C9JPN6 131 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 SEC11BP0C7V7 166 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 S100A11P31949 105 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 SULT1A1P50225 295 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 RANP62826 216 aaKnown RBP7.03□□□□□ -1.28
DDX41-216ENST00000513562 GAGE1Q13065 139 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 GAGE4Q13068 117 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 GAGE5Q13069 117 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 GAGE13Q4V321 117 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 NIT1Q86X76 327 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 MITD1Q8WV92 249 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 ASB13Q8WXK3 278 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 KCNS1Q96KK3 526 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 C2orf50Q96LR7 162 aa7.03□□□□□ -1.28
DDX41-216ENST00000513562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.03□□□□□ -1.28
DDX41-216ENST00000513562 CYB561D1Q8N8Q1 229 aa7.02□□□□□ -1.29
DDX41-216ENST00000513562 UBE2WQ96B02 151 aa7.02□□□□□ -1.29
DDX41-216ENST00000513562 KLK12Q9UKR0 248 aa7.02□□□□□ -1.29
DDX41-216ENST00000513562 LSM5Q9Y4Y9 91 aaKnown RBP7.02□□□□□ -1.29
DDX41-216ENST00000513562 URGCP-MRPS24S4R325 110 aa7.02□□□□□ -1.29
DDX41-216ENST00000513562 A0A0D9SG52 128 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 IGSF23A1L1A6 192 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 F6UZH7 168 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 PANO1I0J062 215 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 CCSO14618 274 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 HBG1P69891 147 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 HBG2P69892 147 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 ZNF506Q5JVG8 444 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 OR10G9Q8NGN4 311 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 PTH2Q96A98 100 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
DDX41-216ENST00000513562 LYRM2Q9NU23 88 aaPredicted RBP7.01□□□□□ -1.29
DDX41-216ENST00000513562 GAS8-AS1O95177 125 aa7□□□□□ -1.29
DDX41-216ENST00000513562 ATP6V1FQ16864 119 aa7□□□□□ -1.29
DDX41-216ENST00000513562 SPANXN2Q5MJ10 180 aa7□□□□□ -1.29
DDX41-216ENST00000513562 FFAR4Q5NUL3 377 aa7□□□□□ -1.29
DDX41-216ENST00000513562 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
DDX41-216ENST00000513562 STX12Q86Y82 276 aa7□□□□□ -1.29
DDX41-216ENST00000513562 TMEM252Q8N6L7 170 aa7□□□□□ -1.29
DDX41-216ENST00000513562 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
DDX41-216ENST00000513562 TVP23CQ96ET8 276 aa7□□□□□ -1.29
DDX41-216ENST00000513562 CHCHD7Q9BUK0 85 aa7□□□□□ -1.29
DDX41-216ENST00000513562 Q9UF83 564 aa7□□□□□ -1.29
DDX41-216ENST00000513562 NAP1L6A6NFF2 107 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 PGPEP1LA6NFU8 196 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 OR7C2O60412 319 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 PVALBP20472 110 aaPredicted RBP6.99□□□□□ -1.29
DDX41-216ENST00000513562 UBE2L3P68036 154 aaKnown RBP6.99□□□□□ -1.29
DDX41-216ENST00000513562 Q0VG73 95 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 ODF1Q14990 250 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 ELOBQ15370 118 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 HSD17B11Q8NBQ5 300 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 PARLQ9H300 379 aa6.99□□□□□ -1.29
DDX41-216ENST00000513562 C11orf21Q9P2W6 132 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms