RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 NHLRC2Q8NBF2 726 aa5.47□□□□□ -1.53
HMGXB3-204ENST00000513318 TMEM263Q8WUH6 116 aaKnown RBP5.47□□□□□ -1.53
HMGXB3-204ENST00000513318 ZC2HC1AQ96GY0 325 aa5.47□□□□□ -1.53
HMGXB3-204ENST00000513318 SMIM7Q9BQ49 75 aa5.47□□□□□ -1.53
HMGXB3-204ENST00000513318 TGP01266 2768 aa5.47□□□□□ -1.53
HMGXB3-204ENST00000513318 STAB2Q8WWQ8 2551 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 A0A0J9YWU9 116 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 CBY3A6NI87 242 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 FABP5P3A8MUU1 101 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 ZNF705GA8MUZ8 300 aaPredicted RBP5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 IGLV2-8P01709 118 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 HTN1P15515 57 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 ZNF80P51504 273 aaPredicted RBP5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 CEBPGP53567 150 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 SRSF3P84103 164 aaKnown RBP5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 ZNF674Q2M3X9 581 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 TDRG1Q3Y452 100 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 ANXA2RQ3ZCQ2 193 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 MUC21Q5SSG8 566 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 IBA57Q5T440 356 aaKnown RBP5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 FAM162BQ5T6X4 162 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 Q6ZQT7 251 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 RNASE8Q8TDE3 154 aaKnown RBP5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 KCNS1Q96KK3 526 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 SDF2L1Q9HCN8 221 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 BIN3Q9NQY0 253 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 NAGKQ9UJ70 344 aa5.46□□□□□ -1.54
HMGXB3-204ENST00000513318 TRGV11A0A075B6L2 103 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 TEX48A0A1B0GUV7 120 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 ZNF727A8MUV8 499 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 SNURFLB1AK76 121 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 SH2D1AO60880 128 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 MGST1P10620 155 aaKnown RBP5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 ZNF415Q09FC8 603 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 FAM74A3Q4VXF1 159 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 PRR27Q6MZM9 219 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 UQCC3Q6UW78 93 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 EDA2RQ9HAV5 297 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 LY96Q9Y6Y9 160 aa5.45□□□□□ -1.54
HMGXB3-204ENST00000513318 PLAC8L1A1L4L8 177 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 LINC00862A6NCI5 91 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 PGPEP1LA6NFU8 196 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 LYRM9A8MSI8 78 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 C9JQL5 133 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 DEFB4AO15263 64 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 PAX4O43316 350 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 PRM2P04554 102 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 TYMSP04818 313 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 AZU1P20160 251 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 CRIP1P50238 77 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 TCL1AP56279 114 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 SOHLH1Q5JUK2 328 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 C11orf72Q8NBR9 251 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 IL17DQ8TAD2 202 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 C11orf21Q9P2W6 132 aa5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 TIMM8BQ9Y5J9 83 aaPredicted RBP5.44□□□□□ -1.54
HMGXB3-204ENST00000513318 IGKV3D-20A0A0C4DH25 116 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 B4DEV8 164 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 ORM1P02763 201 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 CXCL1P09341 107 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 SFTA3P0C7M3 94 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 SPART-AS1P0CW21 52 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 EMP1P54849 157 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 DNLZQ5SXM8 178 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 FAM222AQ5U5X8 452 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 LINC01551Q86U37 167 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 COMMD7Q86VX2 200 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 SLC7A5P1Q8MH63 180 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 OCC1Q8TAD7 63 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 DAZAP1Q96EP5 407 aaKnown RBP5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 GSN-AS1Q9NRJ2 163 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 NAT8Q9UHE5 227 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
HMGXB3-204ENST00000513318 IGHV3-16A0A0C4DH30 117 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 CXorf65A6NEN9 183 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 KRBOX1C9JBD0 128 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 K7EN84 100 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 M0R036 132 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 P01737 135 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 S100A4P26447 101 aaKnown RBP5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 ASIPP42127 132 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 DAZ2Q13117 558 aaKnown RBP5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 OR5I1Q13606 314 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 TMEM241Q24JQ0 296 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 FAM231DQ6ZW35 169 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 C11orf45Q8TAV5 145 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 WWC2-AS2Q96NR7 200 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 SPXQ9BT56 116 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 NOP10Q9NPE3 64 aaKnown RBP5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 MDFICQ9P1T7 246 aa5.42□□□□□ -1.54
HMGXB3-204ENST00000513318 XKRY2A2RUG3 117 aa5.41□□□□□ -1.54
HMGXB3-204ENST00000513318 GNRH2O43555 120 aa5.41□□□□□ -1.54
HMGXB3-204ENST00000513318 RNASE3P12724 160 aaKnown RBP5.41□□□□□ -1.54
HMGXB3-204ENST00000513318 S100A1P23297 94 aa5.41□□□□□ -1.54
HMGXB3-204ENST00000513318 RPS20P60866 119 aaKnown RBP5.41□□□□□ -1.54
HMGXB3-204ENST00000513318 DAD1P61803 113 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms