RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 ACTR3CQ9C0K3 210 aaPredicted RBP13.13□□□□□ -0.31
MATR3-221ENST00000513121 C11orf21Q9P2W6 132 aa13.13□□□□□ -0.31
MATR3-221ENST00000513121 TRAV21A0A0B4J279 112 aa13.12□□□□□ -0.31
MATR3-221ENST00000513121 SUMO1P63165 101 aaKnown RBP13.12□□□□□ -0.31
MATR3-221ENST00000513121 RGS21Q2M5E4 152 aa13.12□□□□□ -0.31
MATR3-221ENST00000513121 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
MATR3-221ENST00000513121 SPXQ9BT56 116 aa13.12□□□□□ -0.31
MATR3-221ENST00000513121 ICOSQ9Y6W8 199 aa13.12□□□□□ -0.31
MATR3-221ENST00000513121 SMLR1H3BR10 107 aa13.11□□□□□ -0.31
MATR3-221ENST00000513121 CXorf1O96002 111 aa13.11□□□□□ -0.31
MATR3-221ENST00000513121 MED14OSP0DP75 135 aa13.11□□□□□ -0.31
MATR3-221ENST00000513121 CYTL1Q9NRR1 136 aa13.11□□□□□ -0.31
MATR3-221ENST00000513121 EPDR1Q9UM22 224 aa13.11□□□□□ -0.31
MATR3-221ENST00000513121 PSG8Q9UQ74 426 aa13.11□□□□□ -0.31
MATR3-221ENST00000513121 APOBP04114 4563 aaKnown RBP13.11□□□□□ -0.31
MATR3-221ENST00000513121 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
MATR3-221ENST00000513121 IQCF2Q8IXL9 164 aa13.1□□□□□ -0.31
MATR3-221ENST00000513121 LINC00479Q96M42 142 aa13.1□□□□□ -0.31
MATR3-221ENST00000513121 TMEM167BQ9NRX6 74 aa13.1□□□□□ -0.31
MATR3-221ENST00000513121 PCLOQ9Y6V0 5065 aa13.1□□□□□ -0.31
MATR3-221ENST00000513121 TRGV4A0A0C4DH28 118 aa13.09□□□□□ -0.31
MATR3-221ENST00000513121 SLAQ13239 276 aa13.09□□□□□ -0.31
MATR3-221ENST00000513121 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 SERTM2A0A1B0GWG4 89 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 M0R2P5 195 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 NXPH4O95158 308 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 TTC32Q5I0X7 151 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 PRNTQ86SH4 94 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 TMEM75Q8N9X5 138 aa13.08□□□□□ -0.32
MATR3-221ENST00000513121 TRAV4A0A0B4J268 109 aa13.07□□□□□ -0.32
MATR3-221ENST00000513121 TRAV34A0A0B4J273 112 aa13.07□□□□□ -0.32
MATR3-221ENST00000513121 A0A1W2PPQ1 181 aa13.07□□□□□ -0.32
MATR3-221ENST00000513121 K7EQD1 137 aa13.07□□□□□ -0.32
MATR3-221ENST00000513121 ARPC5O15511 151 aa13.07□□□□□ -0.32
MATR3-221ENST00000513121 FGF8P55075 233 aaPredicted RBP13.07□□□□□ -0.32
MATR3-221ENST00000513121 FLI1Q01543 452 aaPredicted RBP13.07□□□□□ -0.32
MATR3-221ENST00000513121 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
MATR3-221ENST00000513121 SDF2L1Q9HCN8 221 aa13.07□□□□□ -0.32
MATR3-221ENST00000513121 LOC100131303A0A0U1RQF7 123 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 CTXND1A0A1B0GTU2 59 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 SIVA1O15304 175 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 GCGP01275 180 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 GYPEP15421 78 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 DPPA3Q6W0C5 159 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 CYB561D1Q8N8Q1 229 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 OR4C5Q8NGB2 326 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 ABCA13Q86UQ4 5058 aa13.06□□□□□ -0.32
MATR3-221ENST00000513121 LINC00315P59091 139 aa13.05□□□□□ -0.32
MATR3-221ENST00000513121 UBE2G2P60604 165 aa13.05□□□□□ -0.32
MATR3-221ENST00000513121 NEGR1Q7Z3B1 354 aa13.05□□□□□ -0.32
MATR3-221ENST00000513121 KCNS1Q96KK3 526 aa13.05□□□□□ -0.32
MATR3-221ENST00000513121 TNFRSF18Q9Y5U5 241 aa13.05□□□□□ -0.32
MATR3-221ENST00000513121 C9JCJ5 164 aa13.04□□□□□ -0.32
MATR3-221ENST00000513121 TAAR5O14804 337 aa13.04□□□□□ -0.32
MATR3-221ENST00000513121 PFN1P07737 140 aaKnown RBP13.04□□□□□ -0.32
MATR3-221ENST00000513121 Q6ZRN7 208 aaPredicted RBP13.04□□□□□ -0.32
MATR3-221ENST00000513121 C16orf90A8MZG2 172 aa13.03□□□□□ -0.32
MATR3-221ENST00000513121 K7EQM0 130 aa13.03□□□□□ -0.32
MATR3-221ENST00000513121 SRIP30626 198 aa13.03□□□□□ -0.32
MATR3-221ENST00000513121 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
MATR3-221ENST00000513121 AKR1C8PQ5T2L2 129 aa13.03□□□□□ -0.32
MATR3-221ENST00000513121 C9orf85Q96MD7 179 aa13.03□□□□□ -0.32
MATR3-221ENST00000513121 FAM74A7A6NL05 159 aa13.02□□□□□ -0.33
MATR3-221ENST00000513121 GATA1P15976 413 aaPredicted RBP13.02□□□□□ -0.33
MATR3-221ENST00000513121 KRTAP10-2P60368 255 aa13.02□□□□□ -0.33
MATR3-221ENST00000513121 OR11H4Q8NGC9 324 aa13.02□□□□□ -0.33
MATR3-221ENST00000513121 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 RS1O15537 224 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 IFNA7P01567 189 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 RNASE3P12724 160 aaKnown RBP13.01□□□□□ -0.33
MATR3-221ENST00000513121 FHITP49789 147 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 SPATA12Q7Z6I5 190 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 WFDC10BQ8IUB3 73 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 ARL2-SNX15V9GYD0 113 aa13.01□□□□□ -0.33
MATR3-221ENST00000513121 IGHV3-73A0A0B4J1V6 119 aa13□□□□□ -0.33
MATR3-221ENST00000513121 PGPEP1LA6NFU8 196 aa13□□□□□ -0.33
MATR3-221ENST00000513121 PEX7O00628 323 aa13□□□□□ -0.33
MATR3-221ENST00000513121 ORM1P02763 201 aa13□□□□□ -0.33
MATR3-221ENST00000513121 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
MATR3-221ENST00000513121 SAPCD1Q5SSQ6 148 aa13□□□□□ -0.33
MATR3-221ENST00000513121 PCNPQ8WW12 178 aaKnown RBP13□□□□□ -0.33
MATR3-221ENST00000513121 MAP1LC3B2A6NCE7 125 aa12.99□□□□□ -0.33
MATR3-221ENST00000513121 FBLL1A6NHQ2 334 aaKnown RBP12.99□□□□□ -0.33
MATR3-221ENST00000513121 CRIP1P50238 77 aa12.99□□□□□ -0.33
MATR3-221ENST00000513121 KCNRGQ8N5I3 272 aa12.99□□□□□ -0.33
MATR3-221ENST00000513121 KRTAP4-5Q9BYR2 181 aa12.99□□□□□ -0.33
MATR3-221ENST00000513121 MAP1LC3BQ9GZQ8 125 aa12.99□□□□□ -0.33
MATR3-221ENST00000513121 ZFP69Q49AA0 526 aa12.98□□□□□ -0.33
MATR3-221ENST00000513121 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
MATR3-221ENST00000513121 Q86TA4 180 aa12.98□□□□□ -0.33
MATR3-221ENST00000513121 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
MATR3-221ENST00000513121 Q6ZSN1 163 aa12.97□□□□□ -0.33
MATR3-221ENST00000513121 FUSP35637 526 aaKnown RBP eCLIP12.96□□□□□ -0.331e-7■■■■□ 24.9
MATR3-221ENST00000513121 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.33
MATR3-221ENST00000513121 PTH2Q96A98 100 aa12.96□□□□□ -0.33
MATR3-221ENST00000513121 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms