RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 KNL1Q8NG31 2342 aa0.62□□□□□ -2.31
GYPA-209ENST00000512789 DENND4CQ5VZ89 1909 aa0.62□□□□□ -2.31
GYPA-209ENST00000512789 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
GYPA-209ENST00000512789 CD163L1Q9NR16 1453 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 KNTC1P50748 2209 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 TRBV6-4A0A1B0GX49 114 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 TCRBV4S1A1TA0A5B7 111 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 CCL16O15467 120 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 KRR1Q13601 381 aaKnown RBP0.61□□□□□ -2.31
GYPA-209ENST00000512789 RGS21Q2M5E4 152 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 OR51A2Q8NGJ7 313 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 SLC25A40Q8TBP6 338 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 CANT1Q8WVQ1 401 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 PRADC1Q9BSG0 188 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 C14orf105Q9NVL8 296 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 GLTPQ9NZD2 209 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
GYPA-209ENST00000512789 CACNA1CQ13936 2221 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 DUOX1Q9NRD9 1551 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 DNAH8Q96JB1 4490 aa0.61□□□□□ -2.31
GYPA-209ENST00000512789 MUC17Q685J3 4493 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
GYPA-209ENST00000512789 NFAT5O94916 1531 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 EML5Q05BV3 1969 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 TNRC6AQ8NDV7 1962 aaKnown RBP0.6□□□□□ -2.31
GYPA-209ENST00000512789 A0A087WUJ7 227 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 LOC730098B7Z3J9 87 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 CCL25O15444 150 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 TIMM17BO60830 172 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 GADD45GO95257 159 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 LYPLA2O95372 231 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 AESQ08117 197 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 BCL2L15Q5TBC7 163 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 GNPDA2Q8TDQ7 276 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 KIFC1Q9BW19 673 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 PRELID3BQ9Y3B1 194 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 LY96Q9Y6Y9 160 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 PLXNA4Q9HCM2 1894 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 CEP192Q8TEP8 1941 aa0.6□□□□□ -2.31
GYPA-209ENST00000512789 LPAP08519 4548 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 ABCA1O95477 2261 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 EIF3AQ14152 1382 aaKnown RBP0.59□□□□□ -2.31
GYPA-209ENST00000512789 OR2T8A6NH00 312 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 A8MWV9 139 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 ERP29P30040 261 aaKnown RBP0.59□□□□□ -2.31
GYPA-209ENST00000512789 DYNLT1P63172 113 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 C4orf22Q6V702 233 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 C12orf45Q8N5I9 185 aaPredicted RBP0.59□□□□□ -2.31
GYPA-209ENST00000512789 WFDC5Q8TCV5 224 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 NMNAT1Q9HAN9 279 aaPredicted RBP0.59□□□□□ -2.31
GYPA-209ENST00000512789 UQCC1Q9NVA1 299 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 TNFSF18Q9UNG2 199 aa0.59□□□□□ -2.31
GYPA-209ENST00000512789 ZGRF1Q86YA3 2104 aa0.59□□□□□ -2.32
GYPA-209ENST00000512789 PSME4Q14997 1843 aa0.59□□□□□ -2.32
GYPA-209ENST00000512789 CDK5RAP2Q96SN8 1893 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 RTL9Q8NET4 1388 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 IGHV1-58A0A0C4DH39 117 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 NUPR1O60356 82 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 ITGB3BPQ13352 177 aaPredicted RBP0.58□□□□□ -2.32
GYPA-209ENST00000512789 LINC00575Q6W349 94 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 TEN1Q86WV5 123 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 ADAT3Q96EY9 351 aaPredicted RBP0.58□□□□□ -2.32
GYPA-209ENST00000512789 UBAP1Q9NZ09 502 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 CADP27708 2225 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 PTPRFP10586 1907 aa0.58□□□□□ -2.32
GYPA-209ENST00000512789 HELZP42694 1942 aaKnown RBP0.58□□□□□ -2.32
GYPA-209ENST00000512789 CPSF1Q10570 1443 aaKnown RBP0.57□□□□□ -2.32
GYPA-209ENST00000512789 EDC4Q6P2E9 1401 aaKnown RBP0.57□□□□□ -2.32
GYPA-209ENST00000512789 TANC1Q9C0D5 1861 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 PLCE1Q9P212 2302 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 TLCD2A6NGC4 264 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 SMIM9A6NGZ8 99 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 GGCTO75223 188 aaKnown RBP0.57□□□□□ -2.32
GYPA-209ENST00000512789 IGLV3-1P01715 115 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 PI4KAP42356 2102 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 EFNA4P52798 201 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 AKIRIN2Q53H80 203 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 C22orf39Q6P5X5 142 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 HAGHLQ6PII5 290 aaPredicted RBP0.57□□□□□ -2.32
GYPA-209ENST00000512789 OR8J2Q8NGG1 315 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 OR52L1Q8NGH7 329 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 OR5D14Q8NGL3 314 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 SMR3AQ99954 134 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 SLC25A21Q9BQT8 299 aaPredicted RBP0.57□□□□□ -2.32
GYPA-209ENST00000512789 IMUPQ9GZP8 106 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 TMEM133Q9H2Q1 129 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 IDI2-AS1Q9NZ38 188 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 F5P12259 2224 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 SCN3AQ9NY46 2000 aa0.57□□□□□ -2.32
GYPA-209ENST00000512789 MYLKQ15746 1914 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 ZFC3H1O60293 1989 aaKnown RBP0.56□□□□□ -2.32
GYPA-209ENST00000512789 H3BRM9 83 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 NDUFB3O43676 98 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 HAND1O96004 215 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 PIGPP57054 158 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 MYL6P60660 151 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 RANP62826 216 aaKnown RBP0.56□□□□□ -2.32
GYPA-209ENST00000512789 LIN52Q52LA3 116 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 SPRNQ5BIV9 151 aa0.56□□□□□ -2.32
GYPA-209ENST00000512789 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms