RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NEGR1Q7Z3B1 354 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 LYPD1Q8N2G4 141 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 PCNPQ8WW12 178 aaKnown RBP4.91□□□□□ -1.62
USP46-208ENST00000512656 FAM167A-AS1Q96KT0 104 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 TXNDC17Q9BRA2 123 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 SPXQ9BT56 116 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 SLC25A2Q9BXI2 301 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 MRPL16Q9NX20 251 aaKnown RBP4.91□□□□□ -1.62
USP46-208ENST00000512656 LENEPQ9Y5L5 61 aa4.91□□□□□ -1.62
USP46-208ENST00000512656 TRGV11A0A075B6L2 103 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 PRAF2O60831 178 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 IFNA5P01569 189 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 EVI2AP22794 236 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 SRIP30626 198 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 TAS2R45P59539 299 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 ASAH1Q13510 395 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 ZNF266Q14584 549 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 FAM74A1Q5RGS3 127 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 LYPD5Q6UWN5 251 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 FAM159AQ6UWV7 190 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 Q6ZRN7 208 aaPredicted RBP4.9□□□□□ -1.63
USP46-208ENST00000512656 LINC00299Q6ZSB3 139 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 IQCF2Q8IXL9 164 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 THAP6Q8TBB0 222 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 ENKURQ8TC29 256 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 S100ZQ8WXG8 99 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 PHYHIPLQ96FC7 376 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 NMES1Q9C002 83 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 TP53TG3Q9ULZ0 132 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 LY96Q9Y6Y9 160 aa4.9□□□□□ -1.63
USP46-208ENST00000512656 EPM2AB3EWF7 344 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 C9JCJ5 164 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 PET100P0DJ07 73 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 RANP62826 216 aaKnown RBP4.89□□□□□ -1.63
USP46-208ENST00000512656 UBE2L3P68036 154 aaKnown RBP4.89□□□□□ -1.63
USP46-208ENST00000512656 KHDC3LQ587J8 217 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 MUC21Q5SSG8 566 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 PRR9Q5T870 116 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 Q6AWC8 147 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 SH2D6Q7Z4S9 175 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 C10orf126Q8N4M7 172 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 OR10G4Q8NGN3 311 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 Q8TAT8 98 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 CMTM2Q8TAZ6 248 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 SCGB1C1Q8TD33 95 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 RASL10AQ92737 203 aa4.89□□□□□ -1.63
USP46-208ENST00000512656 WDR61Q9GZS3 305 aaKnown RBP4.89□□□□□ -1.63
USP46-208ENST00000512656 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 A0A087WTM6 91 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 K7EQD1 137 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 SIX6O95475 246 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 TMEM183BQ1AE95 376 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 TDRG1Q3Y452 100 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 LRRC37A5PQ49AS3 106 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 FFAR4Q5NUL3 377 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 TMEM183AQ8IXX5 376 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 ARL6IP6Q8N6S5 226 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 ZNF479Q96JC4 524 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 ATP5SQ99766 215 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 OR5AC2Q9NZP5 309 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 MSRB1Q9NZV6 116 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 MDFICQ9P1T7 246 aa4.88□□□□□ -1.63
USP46-208ENST00000512656 TRAV4A0A0B4J268 109 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 TRAV21A0A0B4J279 112 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 M0R2P5 195 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 SFTA3P0C7M3 94 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 DNAH10OSP0CZ25 163 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 Q6ZQT7 251 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 OR4C5Q8NGB2 326 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 PPP1R1CQ8WVI7 109 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 FRZBQ92765 325 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 KCNS1Q96KK3 526 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 HYLS1Q96M11 299 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 OTORQ9NRC9 128 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 NAGKQ9UJ70 344 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 HERC1Q15751 4861 aa4.87□□□□□ -1.63
USP46-208ENST00000512656 A0A1W2PPV4 95 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 PGPA6NDG6 321 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 INMT-MINDY4F8WBC2 141 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 H0YIZ8 118 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 PSCAO43653 123 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 SSNA1O43805 119 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 CIDEAO60543 219 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 CRYGDP07320 174 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 PFN1P07737 140 aaKnown RBP4.86□□□□□ -1.63
USP46-208ENST00000512656 RPL12P30050 165 aaKnown RBP4.86□□□□□ -1.63
USP46-208ENST00000512656 TIRAPP58753 221 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 ACOT6Q3I5F7 207 aaPredicted RBP4.86□□□□□ -1.63
USP46-208ENST00000512656 PQLC2Q6ZP29 291 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 WFDC10BQ8IUB3 73 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 NHLRC2Q8NBF2 726 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 SDF2L1Q9HCN8 221 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 MBD2Q9UBB5 411 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 HSPB11Q9Y547 144 aa4.86□□□□□ -1.63
USP46-208ENST00000512656 TRAV8-6A0A0B4J262 113 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 IGHV3-16A0A0C4DH30 117 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 IGHV3-38A0A0C4DH36 116 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 SERTM2A0A1B0GWG4 89 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms