RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 WFDC10BQ8IUB3 73 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 Q8N976 141 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 CIRBP-AS1Q8TBR5 109 aa6.97□□□□□ -1.29
VCAN-208ENST00000512590 LOXL1Q08397 574 aaPredicted RBP6.96□□□□□ -1.3
VCAN-208ENST00000512590 H0YGX0 51 aa6.96□□□□□ -1.3
VCAN-208ENST00000512590 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.3
VCAN-208ENST00000512590 SCN4AP35499 1836 aa6.96□□□□□ -1.3
VCAN-208ENST00000512590 LAMB1P07942 1786 aa6.96□□□□□ -1.3
VCAN-208ENST00000512590 PLA2G2AP14555 144 aa6.96□□□□□ -1.3
VCAN-208ENST00000512590 QSER1Q2KHR3 1735 aa6.96□□□□□ -1.3
VCAN-208ENST00000512590 SIPA1L3O60292 1781 aaPredicted RBP6.96□□□□□ -1.3
VCAN-208ENST00000512590 H3BRN7 92 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 J3QQQ9 107 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 MLANAQ16655 118 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 TRBV7-3A0A075B6L6 115 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 ZDBF2Q9HCK1 2354 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 DIAPH2-AS1Q14236 149 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 ZNF833PQ6ZTB9 187 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 PLXNB2O15031 1838 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 TRBV19A0A075B6N1 114 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 A0A087X0K7 114 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 SMIM9A6NGZ8 99 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 CD300CQ08708 224 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 PRORYQ9H606 182 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 IGLV2-14P01704 120 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 REG3AQ06141 175 aa6.95□□□□□ -1.3
VCAN-208ENST00000512590 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.94□□□□□ -1.3
VCAN-208ENST00000512590 LY6LH3BQJ8 138 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 TMEM263Q8WUH6 116 aaKnown RBP6.94□□□□□ -1.3
VCAN-208ENST00000512590 LINC00473A8K010 186 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 GREM1O60565 184 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 MIFP14174 115 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 POU2AF1Q16633 256 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 ARAP2Q8WZ64 1704 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 THADAQ6YHU6 1953 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 DOPEY2Q9Y3R5 2298 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 RPL28P46779 137 aaKnown RBP6.94□□□□□ -1.3
VCAN-208ENST00000512590 ADORA2A-AS1P86434 159 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 GATA1P15976 413 aaPredicted RBP6.94□□□□□ -1.3
VCAN-208ENST00000512590 LINC00482Q8N8I6 264 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 SLX1AQ9BQ83 275 aa6.94□□□□□ -1.3
VCAN-208ENST00000512590 KIR3DS1Q14943 382 aa6.93□□□□□ -1.3
VCAN-208ENST00000512590 C1orf229Q6ZS94 237 aaPredicted RBP6.93□□□□□ -1.3
VCAN-208ENST00000512590 SLPIP03973 132 aa6.93□□□□□ -1.3
VCAN-208ENST00000512590 LINC00269Q8N2A0 174 aa6.93□□□□□ -1.3
VCAN-208ENST00000512590 SCN8AQ9UQD0 1980 aa6.93□□□□□ -1.3
VCAN-208ENST00000512590 C20orf78Q9BR46 151 aa6.93□□□□□ -1.3
VCAN-208ENST00000512590 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
VCAN-208ENST00000512590 H0YIZ8 118 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 BPY2O14599 106 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 CTSZQ9UBR2 303 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 SEC16AO15027 2179 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 XGP55808 180 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 PRSS57Q6UWY2 283 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
VCAN-208ENST00000512590 LOC107984640A0A0U1RRK4 108 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 LGALS9O00182 355 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 Q6P435 159 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 IGHV1-58A0A0C4DH39 117 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 PLA2G10O15496 165 aa6.92□□□□□ -1.3
VCAN-208ENST00000512590 ESPL1Q14674 2120 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 CDK5RAP2Q96SN8 1893 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 TMEM89A2RUT3 159 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 C1QCP02747 245 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 FRMD6-AS1P0C7T7 363 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 SCN9AQ15858 1988 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 BCORQ6W2J9 1755 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 RREB1Q92766 1687 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 SYCNQ0VAF6 134 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 MRPL51Q4U2R6 128 aaKnown RBP6.91□□□□□ -1.3
VCAN-208ENST00000512590 FNDC10F2Z333 226 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 LINC00205P59089 165 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 LINC00311Q8N616 119 aa6.91□□□□□ -1.3
VCAN-208ENST00000512590 PRSS47A8MTI9 375 aa6.9□□□□□ -1.3
VCAN-208ENST00000512590 QRFPP83859 136 aa6.9□□□□□ -1.3
VCAN-208ENST00000512590 Q8N9L7 120 aa6.9□□□□□ -1.3
VCAN-208ENST00000512590 RETNLBQ9BQ08 111 aa6.9□□□□□ -1.3
VCAN-208ENST00000512590 NDUFA4L2Q9NRX3 87 aa6.9□□□□□ -1.3
VCAN-208ENST00000512590 FAM215AQ9Y5M1 114 aa6.9□□□□□ -1.3
VCAN-208ENST00000512590 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.31
VCAN-208ENST00000512590 TNRC6CQ9HCJ0 1690 aaKnown RBP6.9□□□□□ -1.31
VCAN-208ENST00000512590 G3V4G9 280 aa6.9□□□□□ -1.31
VCAN-208ENST00000512590 KNL1Q8NG31 2342 aa6.9□□□□□ -1.31
VCAN-208ENST00000512590 C20orf144Q9BQM9 153 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 ZNF491Q8N8L2 437 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 SIRPDQ9H106 197 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 KIAA1551Q9HCM1 1747 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 MPZP25189 248 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 PCP4P48539 62 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 SPTA1P02549 2419 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 TRIP12Q14669 1992 aaPredicted RBP6.89□□□□□ -1.31
VCAN-208ENST00000512590 ECM29Q5VYK3 1845 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
VCAN-208ENST00000512590 C1orf158Q8N1D5 194 aa6.89□□□□□ -1.31
VCAN-208ENST00000512590 MAP6D1Q9H9H5 199 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms