RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 NAGKQ9UJ70 344 aa14.11□□□□□ -0.15
SMAD1-211ENST00000512019 IGHV4-28A0A0C4DH34 117 aa14.1□□□□□ -0.15
SMAD1-211ENST00000512019 ZNF705GA8MUZ8 300 aaPredicted RBP14.1□□□□□ -0.15
SMAD1-211ENST00000512019 SH2D1AO60880 128 aa14.1□□□□□ -0.15
SMAD1-211ENST00000512019 SOHLH1Q5JUK2 328 aa14.1□□□□□ -0.15
SMAD1-211ENST00000512019 Q6ZQT7 251 aa14.1□□□□□ -0.15
SMAD1-211ENST00000512019 Q8NAQ8 132 aa14.1□□□□□ -0.15
SMAD1-211ENST00000512019 TMEM189A5PLL7 270 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 CBY3A6NI87 242 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 IGLV2-8P01709 118 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 MUC21Q5SSG8 566 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 PRR27Q6MZM9 219 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 TMEM263Q8WUH6 116 aaKnown RBP14.09□□□□□ -0.15
SMAD1-211ENST00000512019 C16orf74Q96GX8 76 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 C11orf68Q9H3H3 251 aaKnown RBP14.09□□□□□ -0.15
SMAD1-211ENST00000512019 LY96Q9Y6Y9 160 aa14.09□□□□□ -0.15
SMAD1-211ENST00000512019 PGPEP1LA6NFU8 196 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 SFTA3P0C7M3 94 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 CRIP1P50238 77 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 TDRG1Q3Y452 100 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 ANXA2RQ3ZCQ2 193 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 ZNF493Q6ZR52 646 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 SDF2L1Q9HCN8 221 aa14.08□□□□□ -0.16
SMAD1-211ENST00000512019 TRGV11A0A075B6L2 103 aa14.07□□□□□ -0.16
SMAD1-211ENST00000512019 RNASE8Q8TDE3 154 aaKnown RBP14.07□□□□□ -0.16
SMAD1-211ENST00000512019 ORM1P02763 201 aa14.06□□□□□ -0.16
SMAD1-211ENST00000512019 OCC1Q8TAD7 63 aa14.06□□□□□ -0.16
SMAD1-211ENST00000512019 DAZAP1Q96EP5 407 aaKnown RBP14.06□□□□□ -0.16
SMAD1-211ENST00000512019 C11orf21Q9P2W6 132 aa14.06□□□□□ -0.16
SMAD1-211ENST00000512019 PRM2P04554 102 aa14.05□□□□□ -0.16
SMAD1-211ENST00000512019 AZU1P20160 251 aa14.05□□□□□ -0.16
SMAD1-211ENST00000512019 TMEM241Q24JQ0 296 aa14.05□□□□□ -0.16
SMAD1-211ENST00000512019 NAT8Q9UHE5 227 aa14.05□□□□□ -0.16
SMAD1-211ENST00000512019 A0A0J9YWU9 116 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 B4DEV8 164 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 DEFB4AO15263 64 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 EMP1P54849 157 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 ZNF415Q09FC8 603 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 LINC01559Q495D7 138 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 IBA57Q5T440 356 aaKnown RBP14.04□□□□□ -0.16
SMAD1-211ENST00000512019 LINC01551Q86U37 167 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 TP53TG3Q9ULZ0 132 aa14.04□□□□□ -0.16
SMAD1-211ENST00000512019 SNURFLB1AK76 121 aa14.03□□□□□ -0.16
SMAD1-211ENST00000512019 K7EN84 100 aa14.03□□□□□ -0.16
SMAD1-211ENST00000512019 M0R036 132 aa14.03□□□□□ -0.16
SMAD1-211ENST00000512019 TYMSP04818 313 aa14.03□□□□□ -0.16
SMAD1-211ENST00000512019 OR5I1Q13606 314 aa14.03□□□□□ -0.16
SMAD1-211ENST00000512019 IGKV3D-20A0A0C4DH25 116 aa14.02□□□□□ -0.17
SMAD1-211ENST00000512019 TEX48A0A1B0GUV7 120 aa14.02□□□□□ -0.17
SMAD1-211ENST00000512019 C19orf71A6NCJ1 209 aa14.02□□□□□ -0.17
SMAD1-211ENST00000512019 KRBOX1C9JBD0 128 aa14.02□□□□□ -0.17
SMAD1-211ENST00000512019 P01737 135 aa14.02□□□□□ -0.17
SMAD1-211ENST00000512019 TIMM8BQ9Y5J9 83 aaPredicted RBP14.02□□□□□ -0.17
SMAD1-211ENST00000512019 PLAC8L1A1L4L8 177 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 GNRH2O43555 120 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 ASIPP42127 132 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 TCL1AP56279 114 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 C11orf72Q8NBR9 251 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 IL17DQ8TAD2 202 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
SMAD1-211ENST00000512019 IGHV3-16A0A0C4DH30 117 aa14□□□□□ -0.17
SMAD1-211ENST00000512019 TMEM218A2RU14 115 aa14□□□□□ -0.17
SMAD1-211ENST00000512019 ADIRFQ15847 76 aa14□□□□□ -0.17
SMAD1-211ENST00000512019 TMSB15BA0A087X1C1 80 aa13.99□□□□□ -0.17
SMAD1-211ENST00000512019 LYRM9A8MSI8 78 aa13.99□□□□□ -0.17
SMAD1-211ENST00000512019 CXCL1P09341 107 aa13.99□□□□□ -0.17
SMAD1-211ENST00000512019 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
SMAD1-211ENST00000512019 ERVFC1-1P60608 527 aa13.99□□□□□ -0.17
SMAD1-211ENST00000512019 RPS20P60866 119 aaKnown RBP13.99□□□□□ -0.17
SMAD1-211ENST00000512019 RPL23P62829 140 aaKnown RBP13.99□□□□□ -0.17
SMAD1-211ENST00000512019 DAZ2Q13117 558 aaKnown RBP13.99□□□□□ -0.17
SMAD1-211ENST00000512019 FAM231DQ6ZW35 169 aa13.99□□□□□ -0.17
SMAD1-211ENST00000512019 RNASE7Q9H1E1 156 aaKnown RBP13.99□□□□□ -0.17
SMAD1-211ENST00000512019 MDFICQ9P1T7 246 aa13.99□□□□□ -0.17
SMAD1-211ENST00000512019 XKRY2A2RUG3 117 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 F8W036 122 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 SPART-AS1P0CW21 52 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 RPL19P84098 196 aaKnown RBP13.98□□□□□ -0.17
SMAD1-211ENST00000512019 PNRC1Q12796 327 aaPredicted RBP13.98□□□□□ -0.17
SMAD1-211ENST00000512019 FAM222AQ5U5X8 452 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 NUDT10Q8NFP7 164 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 OR2D3Q8NGH3 330 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 ISOC2Q96AB3 205 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 NUDT11Q96G61 164 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 SPXQ9BT56 116 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 NOP10Q9NPE3 64 aaKnown RBP13.98□□□□□ -0.17
SMAD1-211ENST00000512019 DKK2Q9UBU2 259 aa13.98□□□□□ -0.17
SMAD1-211ENST00000512019 CXorf65A6NEN9 183 aa13.97□□□□□ -0.17
SMAD1-211ENST00000512019 DNLZQ5SXM8 178 aa13.97□□□□□ -0.17
SMAD1-211ENST00000512019 C15orf54Q8N8G6 183 aa13.97□□□□□ -0.17
SMAD1-211ENST00000512019 SEC11CQ9BY50 192 aa13.97□□□□□ -0.17
SMAD1-211ENST00000512019 RPP21Q9H633 154 aaKnown RBP13.97□□□□□ -0.17
SMAD1-211ENST00000512019 GRIFINA4D1Z8 144 aa13.96□□□□□ -0.17
SMAD1-211ENST00000512019 C11orf45Q8TAV5 145 aa13.96□□□□□ -0.17
SMAD1-211ENST00000512019 OSTCQ9NRP0 149 aa13.96□□□□□ -0.17
SMAD1-211ENST00000512019 CELA1Q9UNI1 258 aa13.96□□□□□ -0.17
SMAD1-211ENST00000512019 GATCO43716 136 aaKnown RBP13.95□□□□□ -0.18
SMAD1-211ENST00000512019 RNASE3P12724 160 aaKnown RBP13.95□□□□□ -0.18
SMAD1-211ENST00000512019 ADCYAP1P18509 176 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms