RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 MBP02144 154 aa18.2■□□□□ 0.5
SNF8-208ENST00000510195 ARL14EPLP0DKL9 152 aa18.2■□□□□ 0.5
SNF8-208ENST00000510195 NFE4Q86UQ8 179 aa18.2■□□□□ 0.5
SNF8-208ENST00000510195 TVP23CQ96ET8 276 aa18.2■□□□□ 0.5
SNF8-208ENST00000510195 SDF2L1Q9HCN8 221 aa18.2■□□□□ 0.5
SNF8-208ENST00000510195 C9JCJ5 164 aa18.19■□□□□ 0.5
SNF8-208ENST00000510195 GNRH2O43555 120 aa18.19■□□□□ 0.5
SNF8-208ENST00000510195 PTTG1O95997 202 aa18.19■□□□□ 0.5
SNF8-208ENST00000510195 OR4C5Q8NGB2 326 aa18.19■□□□□ 0.5
SNF8-208ENST00000510195 TXNDC17Q9BRA2 123 aa18.19■□□□□ 0.5
SNF8-208ENST00000510195 NDFIP1Q9BT67 221 aa18.19■□□□□ 0.5
SNF8-208ENST00000510195 TRAV8-1A0A0A6YYK1 113 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 K7EQM0 130 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 HMGB3O15347 200 aaKnown RBP18.18■□□□□ 0.5
SNF8-208ENST00000510195 GYPEP15421 78 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 KRTAP10-2P60368 255 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 C5orf17Q8NAS9 161 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 HSD17B11Q8NBQ5 300 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 ASB13Q8WXK3 278 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 KRTAP4-5Q9BYR2 181 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 MED28Q9H204 178 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 LY96Q9Y6Y9 160 aa18.18■□□□□ 0.5
SNF8-208ENST00000510195 TYMSP04818 313 aa18.17■□□□□ 0.5
SNF8-208ENST00000510195 SH2D6Q7Z4S9 175 aa18.17■□□□□ 0.5
SNF8-208ENST00000510195 RAB24Q969Q5 203 aa18.17■□□□□ 0.5
SNF8-208ENST00000510195 F6UZH7 168 aa18.16■□□□□ 0.5
SNF8-208ENST00000510195 GNG5P63218 68 aa18.16■□□□□ 0.5
SNF8-208ENST00000510195 MAPKAPK5-AS1Q8N8E1 139 aa18.16■□□□□ 0.5
SNF8-208ENST00000510195 PGPEP1Q9NXJ5 209 aa18.16■□□□□ 0.5
SNF8-208ENST00000510195 EREGO14944 169 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 CIDEAO60543 219 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 TCRAP04437 139 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 ATP6V0CP27449 155 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 GCHFRP30047 84 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 TMEM167BQ9NRX6 74 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 TNFSF18Q9UNG2 199 aa18.15■□□□□ 0.5
SNF8-208ENST00000510195 FBLL1A6NHQ2 334 aaKnown RBP18.13■□□□□ 0.49
SNF8-208ENST00000510195 TAAR5O14804 337 aa18.13■□□□□ 0.49
SNF8-208ENST00000510195 CXorf1O96002 111 aa18.13■□□□□ 0.49
SNF8-208ENST00000510195 EVI2AP22794 236 aa18.13■□□□□ 0.49
SNF8-208ENST00000510195 ERVFC1-1P60608 527 aa18.13■□□□□ 0.49
SNF8-208ENST00000510195 DNAH10OSP0CZ25 163 aa18.12■□□□□ 0.49
SNF8-208ENST00000510195 TIRAPP58753 221 aa18.12■□□□□ 0.49
SNF8-208ENST00000510195 ACTR3CQ9C0K3 210 aaPredicted RBP18.12■□□□□ 0.49
SNF8-208ENST00000510195 GIPP09681 153 aaPredicted RBP18.11■□□□□ 0.49
SNF8-208ENST00000510195 GATA1P15976 413 aaPredicted RBP18.11■□□□□ 0.49
SNF8-208ENST00000510195 INO80EQ8NBZ0 244 aaPredicted RBP18.11■□□□□ 0.49
SNF8-208ENST00000510195 EPDR1Q9UM22 224 aa18.11■□□□□ 0.49
SNF8-208ENST00000510195 PSG8Q9UQ74 426 aa18.11■□□□□ 0.49
SNF8-208ENST00000510195 BOLA1Q9Y3E2 137 aa18.11■□□□□ 0.49
SNF8-208ENST00000510195 SUMO1P63165 101 aaKnown RBP18.1■□□□□ 0.49
SNF8-208ENST00000510195 CDPF1Q6NVV7 123 aa18.1■□□□□ 0.49
SNF8-208ENST00000510195 WFDC10BQ8IUB3 73 aa18.1■□□□□ 0.49
SNF8-208ENST00000510195 Q8N1X5 172 aa18.1■□□□□ 0.49
SNF8-208ENST00000510195 SGK494Q96LW2 274 aa18.1■□□□□ 0.49
SNF8-208ENST00000510195 PFN1P07737 140 aaKnown RBP18.09■□□□□ 0.49
SNF8-208ENST00000510195 FLI1Q01543 452 aaPredicted RBP18.09■□□□□ 0.49
SNF8-208ENST00000510195 ZNF876PQ49A33 203 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 ZFP69Q49AA0 526 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 C10orf126Q8N4M7 172 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 CYB561D1Q8N8Q1 229 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 TMEM75Q8N9X5 138 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 PTH2Q96A98 100 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 MSRB1Q9NZV6 116 aa18.09■□□□□ 0.49
SNF8-208ENST00000510195 GCGP01275 180 aa18.08■□□□□ 0.48
SNF8-208ENST00000510195 IGLV2-11P01706 119 aa18.08■□□□□ 0.48
SNF8-208ENST00000510195 ZNF80P51504 273 aaPredicted RBP18.08■□□□□ 0.48
SNF8-208ENST00000510195 SMUG1Q53HV7 270 aa18.08■□□□□ 0.48
SNF8-208ENST00000510195 SAPCD1Q5SSQ6 148 aa18.08■□□□□ 0.48
SNF8-208ENST00000510195 TNFRSF18Q9Y5U5 241 aa18.08■□□□□ 0.48
SNF8-208ENST00000510195 A0A1W2PRE2 83 aa18.07■□□□□ 0.48
SNF8-208ENST00000510195 GGTLC3B5MD39 225 aa18.07■□□□□ 0.48
SNF8-208ENST00000510195 Q5BKY6 102 aa18.07■□□□□ 0.48
SNF8-208ENST00000510195 SH3BGRL3Q9H299 93 aa18.07■□□□□ 0.48
SNF8-208ENST00000510195 C11orf21Q9P2W6 132 aa18.07■□□□□ 0.48
SNF8-208ENST00000510195 BORCS7-ASMTA0A0B4J1R7 106 aa18.06■□□□□ 0.48
SNF8-208ENST00000510195 C9orf85Q96MD7 179 aa18.06■□□□□ 0.48
SNF8-208ENST00000510195 TRBV6-4A0A1B0GX49 114 aa18.05■□□□□ 0.48
SNF8-208ENST00000510195 RS1O15537 224 aa18.05■□□□□ 0.48
SNF8-208ENST00000510195 CFAP126Q5VTH2 177 aa18.05■□□□□ 0.48
SNF8-208ENST00000510195 NHLRC2Q8NBF2 726 aa18.05■□□□□ 0.48
SNF8-208ENST00000510195 PRADC1Q9BSG0 188 aa18.05■□□□□ 0.48
SNF8-208ENST00000510195 LOC100131303A0A0U1RQF7 123 aa18.04■□□□□ 0.48
SNF8-208ENST00000510195 PRNTQ86SH4 94 aa18.04■□□□□ 0.48
SNF8-208ENST00000510195 SLC25A29Q8N8R3 303 aa18.04■□□□□ 0.48
SNF8-208ENST00000510195 A0A087WTM6 91 aa18.03■□□□□ 0.48
SNF8-208ENST00000510195 RNF222A6NCQ9 220 aa18.03■□□□□ 0.48
SNF8-208ENST00000510195 CRYGDP07320 174 aa18.03■□□□□ 0.48
SNF8-208ENST00000510195 RHOHQ15669 191 aa18.03■□□□□ 0.48
SNF8-208ENST00000510195 RPL7L1Q6DKI1 246 aaKnown RBP18.03■□□□□ 0.48
SNF8-208ENST00000510195 SCRT2Q9NQ03 307 aa18.03■□□□□ 0.48
SNF8-208ENST00000510195 PPT1P50897 306 aa18.02■□□□□ 0.48
SNF8-208ENST00000510195 NKX6-2Q9C056 277 aaPredicted RBP18.02■□□□□ 0.48
SNF8-208ENST00000510195 IGHV3-38A0A0C4DH36 116 aa18.01■□□□□ 0.47
SNF8-208ENST00000510195 CTXND1A0A1B0GTU2 59 aa18.01■□□□□ 0.47
SNF8-208ENST00000510195 PIK3CD-AS1Q5SR53 167 aa18.01■□□□□ 0.47
SNF8-208ENST00000510195 DPPA3Q6W0C5 159 aa18.01■□□□□ 0.47
SNF8-208ENST00000510195 FXYD6-FXYD2A0A087WZ82 144 aa18■□□□□ 0.47
SNF8-208ENST00000510195 MGST1P10620 155 aaKnown RBP18■□□□□ 0.47
SNF8-208ENST00000510195 RNASE3P12724 160 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms