RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	NDUFB4	O95168	129 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	CRP	P02741	224 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	CD3D	P04234	171 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	MGST1	P10620	155 aa	Known RBP	5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	COX6A2	Q02221	97 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900		Q6AWC8	147 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	SNX29P2	Q8IUI4	249 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	SAMD10	Q9BYL1	202 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	SHPK	Q9UHJ6	478 aa		5.77	□□□□□ -1.49
PTPN20-223	ENST00000509900	TRBV19	A0A075B6N1	114 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	IGKV2-24	A0A0C4DH68	120 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	SLC38A11	Q08AI6	406 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	ZNF876P	Q49A33	203 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	SCGB2B2	Q4G0G5	96 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	PXDC1	Q5TGL8	231 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	EXOC3-AS1	Q8N2X6	119 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	C15orf54	Q8N8G6	183 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	OR51S1	Q8NGJ8	323 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	NAGK	Q9UJ70	344 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	C14orf166	Q9Y224	244 aa	Known RBP	5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	PRELID1	Q9Y255	219 aa		5.76	□□□□□ -1.49
PTPN20-223	ENST00000509900	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	TRBV7-9	A0A0J9YWB2	115 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900		H3BP45	60 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	WRB	O00258	174 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	HOXB5	P09067	269 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	HIST1H1E	P10412	219 aa	Known RBP	5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	ZNF138	P52744	262 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	SPANXN5	Q5MJ07	72 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	PRSS3P2	Q8NHM4	247 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	RAB2B	Q8WUD1	216 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	LINC00479	Q96M42	142 aa		5.75	□□□□□ -1.49
PTPN20-223	ENST00000509900	AGPAT2	O15120	278 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	CTDSPL	O15194	276 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	COX7A2P2	O60397	106 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	TMEM127	O75204	238 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	TYMS	P04818	313 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	SMIM18	P0DKX4	95 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	RPP30	P78346	268 aa	Known RBP	5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	MIA	Q16674	131 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	KCNIP4	Q6PIL6	250 aa		5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	CIB3	Q96Q77	187 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN20-223	ENST00000509900	GAGE12H	A6NDE8	117 aa		5.73	□□□□□ -1.49
PTPN20-223	ENST00000509900	ANG	P03950	147 aa	Known RBP	5.73	□□□□□ -1.49
PTPN20-223	ENST00000509900	MPV17L2	Q567V2	206 aa		5.73	□□□□□ -1.49
PTPN20-223	ENST00000509900	C10orf113	Q5VZT2	155 aa		5.73	□□□□□ -1.49
PTPN20-223	ENST00000509900	NRG4	Q8WWG1	115 aa		5.73	□□□□□ -1.49
PTPN20-223	ENST00000509900		A0A096LNI7	61 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	LOC100506127	A0A0U1RQW1	187 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	GOSR2	O14653	212 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	SYNGR2	O43760	224 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	NDUFS6	O75380	124 aa	Known RBP	5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	MED6	O75586	246 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	TBP	P20226	339 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	CAV2	P51636	162 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	RRAS2	P62070	204 aa	Predicted RBP	5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	C14orf178	Q8N769	122 aa	Predicted RBP	5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	OR2T35	Q8NGX2	323 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	SOST	Q9BQB4	213 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	GPR132	Q9UNW8	380 aa		5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	STRAP	Q9Y3F4	350 aa	Known RBP	5.72	□□□□□ -1.49
PTPN20-223	ENST00000509900	IGLV1-50	A0A075B6I6	118 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	PGPEP1L	A6NFU8	196 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	FAM24A	A6NFZ4	105 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	TMEM262	E9PQX1	116 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	IFNA7	P01567	189 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	NHLH2	Q02577	135 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	ZNF506	Q5JVG8	444 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	FAAP20	Q6NZ36	180 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	CLPSL2	Q6UWE3	100 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	IZUMO2	Q6UXV1	221 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	ATP5S	Q99766	215 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	PARL	Q9H300	379 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	NPVF	Q9HCQ7	196 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	PRR34	Q9NV39	138 aa		5.71	□□□□□ -1.5
PTPN20-223	ENST00000509900	DIRC3	C9JPN6	131 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	RAB3D	O95716	219 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	FGF8	P55075	233 aa	Predicted RBP	5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	SRPX	P78539	464 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	FOXI1	Q12951	378 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	PDE6H	Q13956	83 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	TRIM63	Q969Q1	353 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	AAMDC	Q9H7C9	122 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	SLC39A9	Q9NUM3	307 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	MTFP1	Q9UDX5	166 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	KCNIP3	Q9Y2W7	256 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	TIMM9	Q9Y5J7	89 aa		5.7	□□□□□ -1.5
PTPN20-223	ENST00000509900	IGLV10-54	A0A075B6I4	117 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900		A0A087WWL8	130 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	SMIM31	A0A1B0GVY4	71 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	TSPAN13	O95857	204 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	KRTAP1-4	P0C5Y4	121 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	PYY	P10082	97 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	TGFBR1	P36897	503 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	ZFP2	Q6ZN57	461 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	CROCCP3	Q8IVE0	287 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	OR10G7	Q8NGN6	311 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	C9orf85	Q96MD7	179 aa		5.69	□□□□□ -1.5
PTPN20-223	ENST00000509900	MGST2	Q99735	147 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms