RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 LRRC75A-AS1Q8N1F1 130 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 GATD1Q8NB37 220 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 OR10D4PQ8NGN7 298 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 ZNF414Q96IQ9 312 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 USMG5Q96IX5 58 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 SLC50A1Q9BRV3 221 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 GPR61Q9BZJ8 451 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 RPP21Q9H633 154 aaKnown RBP5□□□□□ -1.61
TRAPPC11-206ENST00000509857 AKAP6Q13023 2319 aa5□□□□□ -1.61
TRAPPC11-206ENST00000509857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5□□□□□ -1.61
TRAPPC11-206ENST00000509857 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 TMEM89A2RUT3 159 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 SLC17A3O00476 420 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 P01737 135 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 IGHG2P01859 326 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 FABP4P15090 132 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 TPPP2P59282 170 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 RPS20P60866 119 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 PSG3Q16557 428 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 IQCJQ1A5X6 159 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 BLNKQ8WV28 456 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 RNASE7Q9H1E1 156 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 DHRS4-AS1Q9P1J3 65 aa4.99□□□□□ -1.61
TRAPPC11-206ENST00000509857 SPTAN1Q13813 2472 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 IGHV3-21A0A0B4J1V1 117 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 TRAV41A0A0B4J266 112 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 A6NDX4 124 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 APELAP0DMC3 54 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 CT45A10P0DMU9 189 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 COX6B1P14854 86 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 BMI1P35226 326 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 HERV-K104P63124 156 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 HBBP68871 147 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 RHOGP84095 191 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 PRB3Q04118 309 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 LOXL1Q08397 574 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 KLF5Q13887 457 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 SAMD13Q5VXD3 122 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 TOMM20LQ6UXN7 152 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 C19orf35Q6ZS72 473 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 GOLT1AQ6ZVE7 132 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 TEX29Q8N6K0 151 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 NUP35Q8NFH5 326 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 PIFOQ8TCI5 191 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 MRAPQ8TCY5 172 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 HSPB9Q9BQS6 159 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 FAM103A1Q9BTL3 118 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 Q9HAA7 133 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 LENEPQ9Y5L5 61 aa4.98□□□□□ -1.61
TRAPPC11-206ENST00000509857 TRAV40A0A0B4J280 105 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 A0A0G2JLM5 398 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 HIGD1CA8MV81 97 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 A8MWP6 167 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 NDUFA4O00483 81 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 APCSP02743 223 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 PMCHP20382 165 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 HNF1AP20823 631 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 CBLN1P23435 193 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 CD24P25063 80 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 PKIAP61925 76 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 GNG5P63218 68 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 ATP5G2Q06055 141 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 FAM120AOSQ5T036 256 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 NOL4LQ96MY1 436 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 METTL26Q96S19 204 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 NDFIP1Q9BT67 221 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 PSG8Q9UQ74 426 aa4.97□□□□□ -1.61
TRAPPC11-206ENST00000509857 TRAV9-2A0A087WT02 112 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 A0A096LNT2 108 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 TRBV7-9A0A0J9YWB2 115 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 OR2T8A6NH00 312 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 GZMBP10144 247 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 RAB4BP61018 213 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 CLEC12BQ2HXU8 276 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 KLF17Q5JT82 389 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 BAGE3Q86Y29 109 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 ABCA2Q9BZC7 2435 aa4.96□□□□□ -1.62
TRAPPC11-206ENST00000509857 PRRC2AP48634 2157 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 A0A1B0GUT8 65 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 KLLNB2CW77 178 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 CTAG1AP78358 180 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 ZNF493Q6ZR52 646 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 PRNTQ86SH4 94 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 MRPL52Q86TS9 123 aaKnown RBP4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 EXOC3-AS1Q8N2X6 119 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 KLHL30-AS1Q8NEE0 82 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 OR2D3Q8NGH3 330 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
TRAPPC11-206ENST00000509857 SPG11Q96JI7 2443 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 HRNRQ86YZ3 2850 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 CLPSL1A2RUU4 121 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 K7EMT4 169 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 CHEK1O14757 476 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 ZNF324O75467 553 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 SERF1AO75920 110 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 GPX1P07203 203 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms