RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 B4DEV8 164 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 M0R036 132 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 IGLV2-8P01709 118 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 SPART-AS1P0CW21 52 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 ZNF415Q09FC8 603 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 OR5I1Q13606 314 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 TDRG1Q3Y452 100 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 OCC1Q8TAD7 63 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
RNF4-213ENST00000509388 TP53TG3Q9ULZ0 132 aa10.67□□□□□ -0.7
RNF4-213ENST00000509388 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
RNF4-213ENST00000509388 GNRH2O43555 120 aa10.66□□□□□ -0.7
RNF4-213ENST00000509388 S100A4P26447 101 aaKnown RBP10.66□□□□□ -0.7
RNF4-213ENST00000509388 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
RNF4-213ENST00000509388 IBA57Q5T440 356 aaKnown RBP10.66□□□□□ -0.7
RNF4-213ENST00000509388 C11orf45Q8TAV5 145 aa10.66□□□□□ -0.7
RNF4-213ENST00000509388 GSN-AS1Q9NRJ2 163 aa10.66□□□□□ -0.7
RNF4-213ENST00000509388 LY96Q9Y6Y9 160 aa10.66□□□□□ -0.7
RNF4-213ENST00000509388 TMSB15BA0A087X1C1 80 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 TYMSP04818 313 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 SFTA3P0C7M3 94 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 FAM222AQ5U5X8 452 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
RNF4-213ENST00000509388 MDFICQ9P1T7 246 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 NAT8Q9UHE5 227 aa10.65□□□□□ -0.7
RNF4-213ENST00000509388 LYRM9A8MSI8 78 aa10.64□□□□□ -0.71
RNF4-213ENST00000509388 P01737 135 aa10.64□□□□□ -0.71
RNF4-213ENST00000509388 ASIPP42127 132 aa10.64□□□□□ -0.71
RNF4-213ENST00000509388 LINC01559Q495D7 138 aa10.64□□□□□ -0.71
RNF4-213ENST00000509388 DKK2Q9UBU2 259 aa10.64□□□□□ -0.71
RNF4-213ENST00000509388 IGHV3-16A0A0C4DH30 117 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 KRBOX1C9JBD0 128 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 TCL1AP56279 114 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 ERVFC1-1P60608 527 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 C11orf72Q8NBR9 251 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 IL17DQ8TAD2 202 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 SPXQ9BT56 116 aa10.63□□□□□ -0.71
RNF4-213ENST00000509388 PLAC8L1A1L4L8 177 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 GRIFINA4D1Z8 144 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 K7EN84 100 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 DEFB130BP0DP73 79 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 DEFB130AP0DP74 79 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
RNF4-213ENST00000509388 DAD1P61803 113 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
RNF4-213ENST00000509388 ADIRFQ15847 76 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 OR2D3Q8NGH3 330 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
RNF4-213ENST00000509388 TRGV1A0A0A0MS02 117 aa10.61□□□□□ -0.71
RNF4-213ENST00000509388 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
RNF4-213ENST00000509388 NANOS2P60321 138 aaKnown RBP10.61□□□□□ -0.71
RNF4-213ENST00000509388 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
RNF4-213ENST00000509388 NUDT10Q8NFP7 164 aa10.61□□□□□ -0.71
RNF4-213ENST00000509388 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
RNF4-213ENST00000509388 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
RNF4-213ENST00000509388 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
RNF4-213ENST00000509388 TMEM218A2RU14 115 aa10.6□□□□□ -0.71
RNF4-213ENST00000509388 F8W036 122 aa10.6□□□□□ -0.71
RNF4-213ENST00000509388 GATCO43716 136 aaKnown RBP10.6□□□□□ -0.71
RNF4-213ENST00000509388 RPL23P62829 140 aaKnown RBP10.6□□□□□ -0.71
RNF4-213ENST00000509388 C15orf54Q8N8G6 183 aa10.6□□□□□ -0.71
RNF4-213ENST00000509388 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 H3BVH4 76 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 M0R2P5 195 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 SPINK4O60575 86 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 GAGE7O76087 117 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 ARMS2P0C7Q2 107 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 GAGE12FP0CL80 117 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 GAGE12GP0CL81 117 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 GAGE12IP0CL82 117 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 FAM231DQ6ZW35 169 aa10.59□□□□□ -0.71
RNF4-213ENST00000509388 RPP21Q9H633 154 aaKnown RBP10.59□□□□□ -0.71
RNF4-213ENST00000509388 MRPL16Q9NX20 251 aaKnown RBP10.59□□□□□ -0.71
RNF4-213ENST00000509388 CXCL1P09341 107 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 C12orf74Q32Q52 190 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 DNLZQ5SXM8 178 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 Q6ZTI0 123 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 TPPP3Q9BW30 176 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 PHLDA3Q9Y5J5 127 aa10.58□□□□□ -0.72
RNF4-213ENST00000509388 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
RNF4-213ENST00000509388 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
RNF4-213ENST00000509388 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
RNF4-213ENST00000509388 Q6ZTC4 211 aa10.57□□□□□ -0.72
RNF4-213ENST00000509388 SYT8Q8NBV8 401 aa10.57□□□□□ -0.72
RNF4-213ENST00000509388 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
RNF4-213ENST00000509388 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
RNF4-213ENST00000509388 OSTCQ9NRP0 149 aa10.57□□□□□ -0.72
RNF4-213ENST00000509388 TENM3Q9P273 2699 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms