RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 RPL35P42766 123 aaKnown RBP6.12□□□□□ -1.43
SNCA-211ENST00000508895 TDRG1Q3Y452 100 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 SMUG1Q53HV7 270 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 ZNF506Q5JVG8 444 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 LGALS9CQ6DKI2 356 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 ZNF493Q6ZR52 646 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 COX8CQ7Z4L0 72 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 EIF4E3Q8N5X7 224 aaKnown RBP6.12□□□□□ -1.43
SNCA-211ENST00000508895 NHLRC2Q8NBF2 726 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 TXNDC17Q9BRA2 123 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 VAX2Q9UIW0 290 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 TRAV10A0A0B4J240 114 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 PDE6DO43924 150 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 TYMSP04818 313 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 PFN1P07737 140 aaKnown RBP6.11□□□□□ -1.43
SNCA-211ENST00000508895 TAGLN2P37802 199 aaKnown RBP6.11□□□□□ -1.43
SNCA-211ENST00000508895 TOR2AQ5JU69 321 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 SAPCD1Q5SSQ6 148 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 TMEM183AQ8IXX5 376 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 MLST8Q9BVC4 326 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
SNCA-211ENST00000508895 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 TEX48A0A1B0GUV7 120 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 RBFOX3A6NFN3 312 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 CBY3A6NI87 242 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 LYRM9A8MSI8 78 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 IGLV2-8P01709 118 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 SPART-AS1P0CW21 52 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 CRIP1P50238 77 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 TCL1AP56279 114 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 IFITM2Q01629 132 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 CENPWQ5EE01 88 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 IBA57Q5T440 356 aaKnown RBP6.1□□□□□ -1.43
SNCA-211ENST00000508895 LINC00612Q8N6U2 182 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 FAM210AQ96ND0 272 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 NOP10Q9NPE3 64 aaKnown RBP6.1□□□□□ -1.43
SNCA-211ENST00000508895 GSN-AS1Q9NRJ2 163 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 MDFICQ9P1T7 246 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 ZFP30Q9Y2G7 519 aa6.1□□□□□ -1.43
SNCA-211ENST00000508895 DYNC1H1Q14204 4646 aaKnown RBP6.1□□□□□ -1.43
SNCA-211ENST00000508895 HECTD4Q9Y4D8 3996 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 IGKV3D-20A0A0C4DH25 116 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 IGHV3-16A0A0C4DH30 117 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 SH2D1AO60880 128 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 S100A9P06702 114 aaKnown RBP6.09□□□□□ -1.43
SNCA-211ENST00000508895 HTN3P15516 51 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 ZNF415Q09FC8 603 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 DAZ2Q13117 558 aaKnown RBP6.09□□□□□ -1.43
SNCA-211ENST00000508895 ZNF674Q2M3X9 581 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 FAM159AQ6UWV7 190 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 SDF2L1Q9HCN8 221 aa6.09□□□□□ -1.43
SNCA-211ENST00000508895 TIMM8BQ9Y5J9 83 aaPredicted RBP6.09□□□□□ -1.43
SNCA-211ENST00000508895 RAB19A4D1S5 217 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 SNURFLB1AK76 121 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 TMEM250H0YL14 139 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 GNRH2O43555 120 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 SPINK4O60575 86 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 DEFB130BP0DP73 79 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 DEFB130AP0DP74 79 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 DAD1P61803 113 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 FAM162BQ5T6X4 162 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 TMEM88Q6PEY1 159 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 Q6ZTI0 123 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 BAGE2Q86Y30 109 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 PARLQ9H300 379 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 MED9Q9NWA0 146 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
SNCA-211ENST00000508895 GAGE12BA1L429 117 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 C9JCJ5 164 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 C9JQL5 133 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 M0R036 132 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 NDUFS6O75380 124 aaKnown RBP6.07□□□□□ -1.44
SNCA-211ENST00000508895 GAGE7O76087 117 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 SRP19P09132 144 aaKnown RBP6.07□□□□□ -1.44
SNCA-211ENST00000508895 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 RNASE3P12724 160 aaKnown RBP6.07□□□□□ -1.44
SNCA-211ENST00000508895 GNG4P50150 75 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 SRSF3P84103 164 aaKnown RBP6.07□□□□□ -1.44
SNCA-211ENST00000508895 LINC01559Q495D7 138 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 PRR27Q6MZM9 219 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 ZNF575Q86XF7 245 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 KCNS1Q96KK3 526 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 C9orf85Q96MD7 179 aa6.07□□□□□ -1.44
SNCA-211ENST00000508895 MRPL16Q9NX20 251 aaKnown RBP6.07□□□□□ -1.44
SNCA-211ENST00000508895 DNAH11Q96DT5 4516 aa6.06□□□□□ -1.44
SNCA-211ENST00000508895 TRGV1A0A0A0MS02 117 aa6.06□□□□□ -1.44
SNCA-211ENST00000508895 FABP5P3A8MUU1 101 aa6.06□□□□□ -1.44
SNCA-211ENST00000508895 B4DEV8 164 aa6.06□□□□□ -1.44
SNCA-211ENST00000508895 KRBOX1C9JBD0 128 aa6.06□□□□□ -1.44
SNCA-211ENST00000508895 K7EN84 100 aa6.06□□□□□ -1.44
SNCA-211ENST00000508895 RPL19P84098 196 aaKnown RBP6.06□□□□□ -1.44
SNCA-211ENST00000508895 SMIM12Q96EX1 92 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms