RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 IQCF2Q8IXL9 164 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 ARL6IP6Q8N6S5 226 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 HSD17B11Q8NBQ5 300 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 RASL10AQ92737 203 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 ZNF479Q96JC4 524 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 KCNS1Q96KK3 526 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 SDF2L1Q9HCN8 221 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 PKHD1P08F94 4074 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 M0R2P5 195 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 GNRH2O43555 120 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 GYPEP15421 78 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 LINC00315P59091 139 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 TDRG1Q3Y452 100 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
UBE2D3-227ENST00000508818 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 TRAV8-1A0A0A6YYK1 113 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 TRAV4A0A0B4J268 109 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 SERTM2A0A1B0GWG4 89 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 C9JCJ5 164 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 F6UZH7 168 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 K7EQD1 137 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 ARL14EPLP0DKL9 152 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 EVI2AP22794 236 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 GNG5P63218 68 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 INO80EQ8NBZ0 244 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 ASB13Q8WXK3 278 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 RAB24Q969Q5 203 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 SGK494Q96LW2 274 aa6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 ACTR3CQ9C0K3 210 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-227ENST00000508818 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 TAAR5O14804 337 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 PTTG1O95997 202 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 CXorf1O96002 111 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 GHRHP01286 108 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 TYMSP04818 313 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 STAG3L2P0CL84 134 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 STAG3L3P0CL85 134 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 ATP6V0CP27449 155 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 GCHFRP30047 84 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 ERVFC1-1P60608 527 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 SERF2P84101 59 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 ZFP69Q49AA0 526 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 C5orf17Q8NAS9 161 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 NHLRC2Q8NBF2 726 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 OR2G3Q8NGZ4 309 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 AQP10Q96PS8 301 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 PSMG3Q9BT73 122 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 TMEM167BQ9NRX6 74 aa6.9□□□□□ -1.3
UBE2D3-227ENST00000508818 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 BORCS7-ASMTA0A0B4J1R7 106 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 K7EP13 123 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 TCRAP04437 139 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 PPT1P50897 306 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 SUMO1P63165 101 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 ZNF876PQ49A33 203 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 PRNTQ86SH4 94 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 TVP23CQ96ET8 276 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 TNFSF18Q9UNG2 199 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 PSG8Q9UQ74 426 aa6.89□□□□□ -1.31
UBE2D3-227ENST00000508818 FBLL1A6NHQ2 334 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 GCGP01275 180 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 FLI1Q01543 452 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 C10orf126Q8N4M7 172 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 MSRB1Q9NZV6 116 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 EPDR1Q9UM22 224 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 TNFRSF18Q9Y5U5 241 aa6.88□□□□□ -1.31
UBE2D3-227ENST00000508818 FXYD6-FXYD2A0A087WZ82 144 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 TRAV8-6A0A0B4J262 113 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 CIDEAO60543 219 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 IFNA7P01567 189 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 CRYGDP07320 174 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 WFDC10BQ8IUB3 73 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 CYB561D1Q8N8Q1 229 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 PRADC1Q9BSG0 188 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 SH3BGRL3Q9H299 93 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 SCRT2Q9NQ03 307 aa6.87□□□□□ -1.31
UBE2D3-227ENST00000508818 GIPP09681 153 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 GATA1P15976 413 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 Q5BKY6 102 aa6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 Q6ZRN7 208 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 SUN5Q8TC36 379 aa6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
UBE2D3-227ENST00000508818 IGHV3-73A0A0B4J1V6 119 aa6.85□□□□□ -1.31
UBE2D3-227ENST00000508818 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
UBE2D3-227ENST00000508818 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
UBE2D3-227ENST00000508818 A0A1W2PRE2 83 aa6.85□□□□□ -1.31
UBE2D3-227ENST00000508818 GGTLC3B5MD39 225 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms