RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PRIMA1Q86XR5 153 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 OR10D4PQ8NGN7 298 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 PNRC2Q9NPJ4 139 aaKnown RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 F11RQ9Y624 299 aaKnown RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 HLA-DQB1P01920 261 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 GUSBP1Q15486 140 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 CENPWQ5EE01 88 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 NUP35Q8NFH5 326 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 RNASE8Q8TDE3 154 aaKnown RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 TMEM243Q9BU79 118 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 A0A1B0GWB2 263 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 PMS2P5A8MQ11 134 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 UBE2AP49459 152 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 Q6ZSV7 163 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C22orf34Q6ZV56 151 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 CDIP1Q9H305 208 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 RPP21Q9H633 154 aaKnown RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF319Q9P2F9 582 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 ICOSQ9Y6W8 199 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 A6NDX4 124 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 LYPD3O95274 346 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 SPATA31B1PQ5VZV4 182 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 MBD3L1Q8WWY6 194 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 MDFIQ99750 246 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 PARLQ9H300 379 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 PSG8Q9UQ74 426 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-16A0A0C4DH30 117 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 A8MWV9 139 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 G3V318 75 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 H3BUA1 57 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 CRYGDP07320 174 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 NANOS3P60323 173 aaKnown RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 GAGE6Q13070 117 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 FOXI2Q6ZQN5 318 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 TSKUQ8WUA8 353 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 CTSZQ9UBR2 303 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 BRCA2P51587 3418 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-64A0A075B6Q5 118 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV2A0A0B4J234 112 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 PRSS29PA6NIE9 313 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 KNCNA6PVL3 124 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 VWC2LB2RUY7 222 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 FGF16O43320 207 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV1-5P01602 117 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 EDN2P20800 178 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 FOXA3P55318 350 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-208ENST00000508342 RPL18AQ02543 176 aaKnown RBP2.32□□□□□ -2.04
NEDD4-208ENST00000508342 C7orf33Q8WU49 177 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 PMCHL1Q16048 86 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 FOXL2NBQ6ZUU3 175 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 OR11H6Q8NGC7 330 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 KIR2DL5BQ8NHK3 375 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 GTSF1Q8WW33 167 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 C14orf144Q96I85 54 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 HECTD1Q9ULT8 2610 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 TANC2Q9HCD6 1990 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 KIR2DL5BA0A0G2JN68 375 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 KIR2DL5BA0A0G2JPC4 375 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 LEPROTO15243 131 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-208ENST00000508342 KIR2DL5AQ8N109 375 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 ETDCA0A1B0GVM5 59 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 HMSDA8MTL9 139 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 LMO4P61968 165 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 BLCAPP62952 87 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF833PQ6ZTB9 187 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 DEFB125Q8N687 156 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 BAALCQ8WXS3 180 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 PLEKHB2Q96CS7 222 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
NEDD4-208ENST00000508342 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 V9GYH0 126 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 C7orf77A4D0Y5 90 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 RHOHQ15669 191 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 C1orf100Q5SVJ3 147 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 C10orf55Q5SWW7 151 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 CLPSL2Q6UWE3 100 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 AGRNO00468 2067 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 TMEM14DPA8MWL7 114 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 M0R2P5 195 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 MPZP25189 248 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 C17orf58Q2M2W7 97 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 DERL1Q9BUN8 251 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF702PQ9H963 129 aa2.32□□□□□ -2.04
NEDD4-208ENST00000508342 NOP10Q9NPE3 64 aaKnown RBP2.32□□□□□ -2.04
NEDD4-208ENST00000508342 DUTP33316 252 aaKnown RBP2.31□□□□□ -2.04
NEDD4-208ENST00000508342 PFN2P35080 140 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 UBE2D1P51668 147 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 NHLRC3Q5JS37 347 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 XAF1Q6GPH4 301 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 LYPD6Q86Y78 171 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF491Q8N8L2 437 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 IL36BQ9NZH7 164 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 KAAG1Q9UBP8 84 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV2-40A0A087WW87 121 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-208ENST00000508342 A0A087WWC5 75 aa2.31□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV2D-40P01614 121 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms