RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 J3QLW9 94 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 M0R129 80 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 NPFFO15130 113 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 NDUFA2O43678 99 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 TPST1O60507 370 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 ARL11Q969Q4 196 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 LSM2Q9Y333 95 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 PLXNA4Q9HCM2 1894 aa1.51□□□□□ -2.17
TRAPPC13-209ENST00000508304 MYH1P12882 1939 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 ERBINQ96RT1 1412 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 EFCAB10A6NFE3 127 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 ZNF670-ZNF695F2Z2N8 137 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 NCR3O14931 201 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 RHOHQ15669 191 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 OCIAD2Q56VL3 154 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 SLC25A26Q70HW3 274 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 ATP6V0E2Q8NHE4 81 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 ERG28Q9UKR5 140 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 CDK5RAP2Q96SN8 1893 aa1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 TNRC6BQ9UPQ9 1833 aaKnown RBP1.5□□□□□ -2.17
TRAPPC13-209ENST00000508304 MYO18AQ92614 2054 aaKnown RBP1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 TNRC6AQ8NDV7 1962 aaKnown RBP1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 ALPK3Q96L96 1907 aa1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 TRBV20-1A0A075B6N2 111 aa1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 A0A0J9YY99 117 aa1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 GYPBP06028 91 aa1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 PRB4P10163 310 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 SIP14410 1827 aa1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 PRG4Q92954 1404 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-209ENST00000508304 ADGRB2O60241 1585 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 A0A0G2JMM0 328 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 FAM92AA1XBS5 289 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 IGKCP01834 107 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 RRAS2P62070 204 aaPredicted RBP1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 ATP11AUNQ6ZP68 121 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 KCNRGQ8N5I3 272 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 DYNLRB2Q8TF09 96 aa1.48□□□□□ -2.17
TRAPPC13-209ENST00000508304 A6NN06 94 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 M0R2P5 195 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 SNRNP200O75643 2136 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 IGLV3-1P01715 115 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 APOC1P02654 83 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 PDE6GP18545 87 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 RPL37AP61513 92 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 SELENOWP63302 87 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 RPL13AP3Q6NVV1 102 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 CSAG1Q6PB30 78 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 SCIMPQ6UWF3 145 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 LYPD5Q6UWN5 251 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 C1orf54Q8WWF1 131 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 AMELYQ99218 206 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 TMEM191AQ9H0A3 160 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 ATG5Q9H1Y0 275 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 CCDC167Q9P0B6 97 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 CACNA1BQ00975 2339 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 PRRC2BQ5JSZ5 2229 aaKnown RBP1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 TECTAO75443 2155 aa1.47□□□□□ -2.17
TRAPPC13-209ENST00000508304 HELZP42694 1942 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 NINQ8N4C6 2090 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 ERCC6Q03468 1493 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 KIAA1549LQ6ZVL6 1849 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 GNG7O60262 68 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 PYYP10082 97 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 PPDPFLQ8WWR9 84 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 DMAC1Q96GE9 116 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 C22orf24Q9Y442 160 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 BICRAQ9NZM4 1560 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 ANK1P16157 1881 aa1.46□□□□□ -2.18
TRAPPC13-209ENST00000508304 UHRF1BP1LA0JNW5 1464 aa1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 TRAV2A0A0B4J234 112 aa1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 IGF2P01344 180 aa1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 IGHV3-30P01768 117 aa1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 IGHV3-30-5P0DP03 117 aa1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 COPS9Q8WXC6 57 aa1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 IBTKQ9P2D0 1353 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC13-209ENST00000508304 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 K7EP13 123 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 PRB1P04280 392 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 ARL14EPLP0DKL9 152 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 FXYD4P59646 89 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 EMX2Q04743 252 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 MIC13Q5XKP0 118 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 RPL7L1Q6DKI1 246 aaKnown RBP1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 Q6ZQY7 126 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 Q6ZUT4 128 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 Q86TA4 180 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 VSTM2AQ8TAG5 236 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 PDCD10Q9BUL8 212 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 LINC00470Q9BZP3 86 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 MCM3APO60318 1980 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 CASP8AP2Q9UKL3 1982 aa1.44□□□□□ -2.18
TRAPPC13-209ENST00000508304 PTPRGP23470 1445 aa1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 TRBV10-1A0A0K0K1A3 114 aa1.43□□□□□ -2.18
TRAPPC13-209ENST00000508304 HIGD1CA8MV81 97 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms