RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 IGHV3-23P01764 117 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 LGALS1P09382 135 aaKnown RBP3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 LYNX1P0DP58 116 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 PPIFP30405 207 aaKnown RBP3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 UBE2D1P51668 147 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 CRYBA4P53673 196 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 DLX1P56177 255 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 NDPQ00604 133 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 ECSCRQ19T08 205 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGFL4Q6B9Z1 124 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 CLEC19AQ6UXS0 136 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 TEN1Q86WV5 123 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 ZNF575Q86XF7 245 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 RNF182Q8N6D2 247 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 Q8N9W7 124 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 ZNF418Q8TF45 676 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 BAALCQ8WXS3 180 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 TTTY13Q9BZ97 58 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRAV26-2A0A0B4J265 109 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 LOC107984156A0A0G2JMH3 177 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 CLPSL1A2RUU4 121 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 PRSS29PA6NIE9 313 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 C11orf86A6NJI1 115 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 H3BUA1 57 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 VCYO14598 125 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 PLXNB1O43157 2135 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 GAS8-AS1O95177 125 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 MGPP08493 103 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 PSMB2P49721 201 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 UBE2E1P51965 193 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 EFNA4P52798 201 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 UBE2D3P61077 147 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 UBE2D2P62837 147 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 PRB3Q04118 309 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 PMVKQ15126 192 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 MORN3Q6PF18 240 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 AMTNQ6UX39 209 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 SH2D6Q7Z4S9 175 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 ARL17AQ8IVW1 177 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 POM121L12Q8N7R1 296 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 GLMPQ8WWB7 406 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 ITLN2Q8WWU7 325 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 RASL10AQ92737 203 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 TIMM17AQ99595 171 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 KIR2DL4Q99706 377 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 C11orf21Q9P2W6 132 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 MSRB2Q9Y3D2 182 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 SELENOKQ9Y6D0 94 aa3.78□□□□□ -1.8
HMGB3P16-201ENST00000508037 ICE1Q9Y2F5 2266 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV4OR15-8A0A075B7B6 117 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 A0A087WW49 117 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 NDUFA4O00483 81 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 NXPH4O95158 308 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 BRI3O95415 125 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 TSPAN13O95857 204 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 SPINK8P0C7L1 97 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZNF688P0C7X2 276 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 SCGB1C2P0DMR2 95 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 PRB4P10163 310 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 ARL3P36405 182 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 ID1P41134 155 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 CRIP2P52943 208 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 RHOHQ15669 191 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 APRG1Q8IVJ8 170 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 SBSPONQ8IVN8 264 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 C10orf126Q8N4M7 172 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 Q8NA96 180 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 SYT8Q8NBV8 401 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 LINC01560Q8TB33 94 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 USMG5Q96IX5 58 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 CCDC140Q96MF4 163 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 SIRPDQ9H106 197 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 KLK15Q9H2R5 256 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 GEMIN7Q9H840 131 aaKnown RBP3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 PRO1854Q9UHT4 67 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRIOBPQ9H2D6 2365 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 ZGRF1Q86YA3 2104 aa3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 RANBP2P49792 3224 aaKnown RBP3.77□□□□□ -1.81
HMGB3P16-201ENST00000508037 SVILO95425 2214 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 GPR179Q6PRD1 2367 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 XIRP2A4UGR9 3374 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRAV41A0A0B4J266 112 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 A0A0J9YY99 117 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 FAM90A27PA6NNH2 459 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 IGHV1-69P01742 117 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 CD7P09564 240 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 P0DMU3 169 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 FAM231AP0DMU4 169 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 FAM231CP0DMU5 169 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 COX6B1P14854 86 aa3.76□□□□□ -1.81
HMGB3P16-201ENST00000508037 Q5PR19 223 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms