RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 H7BYZ3 331 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 RGS13O14921 159 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 SH2D1AO60880 128 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 RPL19P84098 196 aaKnown RBP6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 RRN3P1Q2M238 152 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 SAPCD1Q5SSQ6 148 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 TMEM183AQ8IXX5 376 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 OCC1Q8TAD7 63 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 TXNDC17Q9BRA2 123 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 TCEAL7Q9BRU2 100 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 ZFP30Q9Y2G7 519 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 LENEPQ9Y5L5 61 aa6.34□□□□□ -1.39
SCAMP1-202ENST00000506858 IGHV1OR15-1A0A075B7D0 117 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 TRBV7-9A0A0J9YWB2 115 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 TRBV6-1A0A0K0K1D8 114 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 PLAC8L1A1L4L8 177 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 K7EN84 100 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 TAGLN2P37802 199 aaKnown RBP6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 GNG4P50150 75 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 TAS2R60P59551 318 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 PEA15Q15121 130 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 Q6AWC8 147 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 ZNF575Q86XF7 245 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 GSN-AS1Q9NRJ2 163 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 MDFICQ9P1T7 246 aa6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 TIMM8BQ9Y5J9 83 aaPredicted RBP6.33□□□□□ -1.4
SCAMP1-202ENST00000506858 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 ZNF727A8MUV8 499 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 TMEM250H0YL14 139 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 ORM1P02763 201 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 S100A9P06702 114 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 PFN1P07737 140 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 NANOS2P60321 138 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 COMMD7Q86VX2 200 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 SMIM7Q9BQ49 75 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 EDA2RQ9HAV5 297 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 TENM2Q9NT68 2774 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 FBLL1A6NHQ2 334 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 FABP5P3A8MUU1 101 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 TYMSP04818 313 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 GZMBP10144 247 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 MIFP14174 115 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 FAM162BQ5T6X4 162 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 FAM159AQ6UWV7 190 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 TMEM256Q8N2U0 113 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 EIF4E3Q8N5X7 224 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 RNASE8Q8TDE3 154 aaKnown RBP6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 NEU1Q99519 415 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 PYGO2Q9BRQ0 406 aa6.32□□□□□ -1.4
SCAMP1-202ENST00000506858 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 CSMD3Q7Z407 3707 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 MUC21A0A0G2JKD1 596 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 MUC21A0A140T8X8 626 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 SSTP61278 116 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 FAM222AQ5U5X8 452 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 C11orf72Q8NBR9 251 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 C20orf144Q9BQM9 153 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 RNASE7Q9H1E1 156 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
SCAMP1-202ENST00000506858 DYNC2H1Q8NCM8 4307 aaKnown RBP6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 IGHV3-16A0A0C4DH30 117 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 SMIM9A6NGZ8 99 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 B4DEV8 164 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 KRBOX1C9JBD0 128 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 SFTA3P0C7M3 94 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 DEFB130BP0DP73 79 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 DEFB130AP0DP74 79 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 SOHLH1Q5JUK2 328 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 CDPF1Q6NVV7 123 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 Q6ZTI0 123 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 COX8CQ7Z4L0 72 aa6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 MRPL16Q9NX20 251 aaKnown RBP6.3□□□□□ -1.4
SCAMP1-202ENST00000506858 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 LINC00862A6NCI5 91 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 C9JCJ5 164 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 GAGE7O76087 117 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 GAGE12FP0CL80 117 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 GAGE12GP0CL81 117 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 GAGE12IP0CL82 117 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 C12orf74Q32Q52 190 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 SLC7A5P1Q8MH63 180 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 NUDT10Q8NFP7 164 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 NUDT11Q96G61 164 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 MUC4Q99102 2169 aa6.29□□□□□ -1.4
SCAMP1-202ENST00000506858 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 C19orf71A6NCJ1 209 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 CXorf65A6NEN9 183 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 H3BVH4 76 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 ADIRFQ15847 76 aa6.28□□□□□ -1.4
SCAMP1-202ENST00000506858 TMEM241Q24JQ0 296 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms