RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 BORCS5Q969J3 196 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 CCDC124Q96CT7 223 aaKnown RBP2.85□□□□□ -1.95
HERC4-213ENST00000506515 IGF2BP2-AS1Q96M15 143 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 TTTY10Q9BZA0 68 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 WFDC10AQ9H1F0 79 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 ZNF586Q9NXT0 402 aa2.85□□□□□ -1.95
HERC4-213ENST00000506515 A0A1B0GW64 132 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 IGHV3-53P01767 116 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 CTSDP07339 412 aaPredicted RBP2.84□□□□□ -1.95
HERC4-213ENST00000506515 CD36P16671 472 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 B2MP61769 119 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 RPL39P5Q59GN2 51 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 C12orf73Q69YU5 71 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 GATD1Q8NB37 220 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 OR10K1Q8NGX5 313 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 MRPL30Q8TCC3 161 aaKnown RBP2.84□□□□□ -1.95
HERC4-213ENST00000506515 DGCR14Q96DF8 476 aaKnown RBP2.84□□□□□ -1.95
HERC4-213ENST00000506515 COMMD5Q9GZQ3 224 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 FKBP11Q9NYL4 201 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 SMPXQ9UHP9 88 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 LRP1BQ9NZR2 4599 aa2.84□□□□□ -1.95
HERC4-213ENST00000506515 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.96
HERC4-213ENST00000506515 NBDYA0A0U1RRE5 68 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 PPP5D1E7EU14 171 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 K7EP13 123 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 NAPSAO96009 420 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 TSPOP30536 169 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 RPL27AP46776 148 aaKnown RBP2.83□□□□□ -1.96
HERC4-213ENST00000506515 CD164Q04900 197 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 USF2Q15853 346 aaPredicted RBP2.83□□□□□ -1.96
HERC4-213ENST00000506515 BSXQ3C1V8 233 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 RBM48Q5RL73 367 aaKnown RBP2.83□□□□□ -1.96
HERC4-213ENST00000506515 SPATA31B1PQ5VZV4 182 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 EIF4E3Q8N5X7 224 aaKnown RBP2.83□□□□□ -1.96
HERC4-213ENST00000506515 Q8NAQ8 132 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 OR51A4Q8NGJ6 313 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 OR10AC1Q8NH08 325 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 CMTM2Q8TAZ6 248 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 CANT1Q8WVQ1 401 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 GINS4Q9BRT9 223 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 FAAP24Q9BTP7 215 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 TREM1Q9NP99 234 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 BABAM2Q9NXR7 383 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 TAS2R4Q9NYW5 299 aa2.83□□□□□ -1.96
HERC4-213ENST00000506515 APOBP04114 4563 aaKnown RBP2.82□□□□□ -1.96
HERC4-213ENST00000506515 J3QRE1 110 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 ADAP1O75689 374 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 CRYZL1O95825 349 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 HLA-AP01891 365 aaKnown RBP2.82□□□□□ -1.96
HERC4-213ENST00000506515 MYL12AP19105 171 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 NPPCP23582 126 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 PSMB9P28065 219 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 DAPP51397 102 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 SNRPD3P62318 126 aaKnown RBP2.82□□□□□ -1.96
HERC4-213ENST00000506515 C12orf74Q32Q52 190 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 DNAL1Q4LDG9 190 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 SAMD13Q5VXD3 122 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 LPCAT4Q643R3 524 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 SPATA12Q7Z6I5 190 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 SPATA24Q86W54 205 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 TMEM56Q96MV1 263 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 CMSS1Q9BQ75 279 aaKnown RBP2.82□□□□□ -1.96
HERC4-213ENST00000506515 RHPN1-AS1Q9BWJ2 59 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 CCDC90BQ9GZT6 254 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 CARHSP1Q9Y2V2 147 aaKnown RBP2.82□□□□□ -1.96
HERC4-213ENST00000506515 ARL2BPQ9Y2Y0 163 aa2.82□□□□□ -1.96
HERC4-213ENST00000506515 V9GYY5 206 aaPredicted RBP2.82□□□□□ -1.96
HERC4-213ENST00000506515 A6NED7 52 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 GGTLC3B5MD39 225 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 DEFB4AO15263 64 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 SYNGR2O43760 224 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 SNAPC5O75971 98 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 PRH1P02810 166 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 APELAP0DMC3 54 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 CRHBPP24387 322 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 GADD45AP24522 165 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 S100A7P31151 101 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 CBX5P45973 191 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 HSPA13P48723 471 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 DEFB131AP59861 70 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 HLA-DRB3P79483 266 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 MEF2BQ02080 365 aaPredicted RBP2.81□□□□□ -1.96
HERC4-213ENST00000506515 FLOT2Q14254 428 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 MSMO1Q15800 293 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 Q56UQ5 140 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 LAIR2Q6ISS4 152 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 Q6ZQT7 251 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 TCF24Q7RTU0 167 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 HS3ST5Q8IZT8 346 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 BPIFB6Q8NFQ5 453 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 TMEM167AQ8TBQ9 72 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 DEFB104AQ8WTQ1 72 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 SMIM19Q96E16 107 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 PGLYRP3Q96LB9 341 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 OR2D2Q9H210 308 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 BANF2Q9H503 90 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 HRASLSQ9HDD0 168 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 BET1LQ9NYM9 111 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms