RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 FAM24AA6NFZ4 105 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 M0R2P5 195 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 CCSO14618 274 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 PLA2G10O15496 165 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 RS1O15537 224 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 LYRM1O43325 122 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 TCRBP04435 133 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 OR10J4P0C629 311 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 GATA1P15976 413 aaPredicted RBP4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 FGF7P21781 194 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 BTCP35070 178 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 TIRAPP58753 221 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 ASAH1Q13510 395 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 PDE6HQ13956 83 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 ZNF266Q14584 549 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 GCSAMLQ5JQS6 135 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 LELP1Q5T871 98 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 SPXQ9BT56 116 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 CHAC1Q9BUX1 264 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 SLC25A2Q9BXI2 301 aa4.54□□□□□ -1.68
NPIPB3-203ENST00000504841 FBLL1A6NHQ2 334 aaKnown RBP4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 FAM25EA8MYX2 175 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 GNRH2O43555 120 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 PFN1P07737 140 aaKnown RBP4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 NBEAP1P0C6P0 100 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 CSN1S1P47710 185 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 RPL29P47914 159 aaKnown RBP4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 LAGE3Q14657 143 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 MIR17HGQ75NE6 70 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 CIRBP-AS1Q8TBR5 109 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 MITD1Q8WV92 249 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 PHYHIPLQ96FC7 376 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 PRADC1Q9BSG0 188 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 C20orf85Q9H1P6 137 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 RPH3ALQ9UNE2 315 aa4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.53□□□□□ -1.68
NPIPB3-203ENST00000504841 TRAV8-3A0A0A6YYJ7 113 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 F6UZH7 168 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 UPK1BO75841 260 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 HNRNPA3P51991 378 aaKnown RBP4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 S100A10P60903 97 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 RHOHQ15669 191 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 Q6AWC8 147 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 DAZ4Q86SG3 579 aaKnown RBP4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 SLC25A29Q8N8R3 303 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 ATP6V0E2Q8NHE4 81 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 FAM167A-AS1Q96KT0 104 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 OR51M1Q9H341 326 aa4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 DAZ3Q9NR90 486 aaKnown RBP4.52□□□□□ -1.69
NPIPB3-203ENST00000504841 HMCN2Q8NDA2 5059 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 IGKV2D-24A0A075B6R9 120 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 TRBV7-9A0A0J9YWB2 115 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 FAM240BA0A1B0GVZ2 78 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 IGSF23A1L1A6 192 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 OR7C2O60412 319 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 TYMSP04818 313 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 DEFA1P59665 94 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 DEFA3P59666 94 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 RANP62826 216 aaKnown RBP4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 UBE2L3P68036 154 aaKnown RBP4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 HBG1P69891 147 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 HBG2P69892 147 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 VWC2Q2TAL6 325 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 ACOT6Q3I5F7 207 aaPredicted RBP4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 TDRG1Q3Y452 100 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 TOR2AQ5JU69 321 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 THAP6Q8TBB0 222 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 DNAJC30Q96LL9 226 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 HYLS1Q96M11 299 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 ATP5SQ99766 215 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 PAXXQ9BUH6 204 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 GTSF1LQ9H1H1 148 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 SDF2L1Q9HCN8 221 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 NUDT15Q9NV35 164 aa4.51□□□□□ -1.69
NPIPB3-203ENST00000504841 TRBV6-4A0A1B0GX49 114 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 RBAKDNA6NC62 111 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 GAGE12JA6NER3 117 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 GGTLC3B5MD39 225 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 IGLV2-11P01706 119 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 PVALBP20472 110 aaPredicted RBP4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 S100A11P31949 105 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 SULT1A1P50225 295 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 GAGE1Q13065 139 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 GAGE4Q13068 117 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 GAGE5Q13069 117 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 ZNF876PQ49A33 203 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 CFAP126Q5VTH2 177 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 DPPA3Q6W0C5 159 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 STX12Q86Y82 276 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 TMEM252Q8N6L7 170 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 Q8N976 141 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 FXYD5Q96DB9 178 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 RMI2Q96E14 147 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 NPCDR1Q9BY65 106 aa4.5□□□□□ -1.69
NPIPB3-203ENST00000504841 TRAV6A0A075B6T7 132 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 TRAV21A0A0B4J279 112 aa4.49□□□□□ -1.69
NPIPB3-203ENST00000504841 DIRC3C9JPN6 131 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms