RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MUC21Q5SSG8 566 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 IBA57Q5T440 356 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 BAGE2Q86Y30 109 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 C11orf72Q8NBR9 251 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 ZC2HC1AQ96GY0 325 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 MLST8Q9BVC4 326 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 MED9Q9NWA0 146 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 SNURFLB1AK76 121 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 CRIP1P50238 77 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 C12orf74Q32Q52 190 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 TOR2AQ5JU69 321 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 DERL1Q9BUN8 251 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 C11orf21Q9P2W6 132 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 NAGKQ9UJ70 344 aa8.49□□□□□ -1.05
PDLIM5-208ENST00000504489 TRGV11A0A075B6L2 103 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 TCL1AP56279 114 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 RAB14P61106 215 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 IFITM2Q01629 132 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 ZNF674Q2M3X9 581 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 FAM162BQ5T6X4 162 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 SMIM12Q96EX1 92 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 SDF2L1Q9HCN8 221 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 NOP10Q9NPE3 64 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 GSN-AS1Q9NRJ2 163 aa8.48□□□□□ -1.05
PDLIM5-208ENST00000504489 RAB19A4D1S5 217 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 GNRH2O43555 120 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 DAD1P61803 113 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 CENPWQ5EE01 88 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 NHLRC2Q8NBF2 726 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 MDFICQ9P1T7 246 aa8.47□□□□□ -1.05
PDLIM5-208ENST00000504489 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 C9JCJ5 164 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 SH2D1AO60880 128 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 IGLV2-8P01709 118 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 TYMSP04818 313 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 SRP19P09132 144 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 GNG4P50150 75 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 CASC10Q5T4H9 136 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 Q6ZTC4 211 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 SPXQ9BT56 116 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 TENM2Q9NT68 2774 aa8.46□□□□□ -1.06
PDLIM5-208ENST00000504489 CSMD3Q7Z407 3707 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 TRBV20OR9-2A0A075B6H5 130 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 IGKV3D-20A0A0C4DH25 116 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 SPINK4O60575 86 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 ORM1P02763 201 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 PARLQ9H300 379 aa8.45□□□□□ -1.06
PDLIM5-208ENST00000504489 B4DEV8 164 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 KRBOX1C9JBD0 128 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 DEFB130BP0DP73 79 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 DEFB130AP0DP74 79 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 PEA15Q15121 130 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 DNLZQ5SXM8 178 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 Q6ZTI0 123 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 BIN3Q9NQY0 253 aa8.44□□□□□ -1.06
PDLIM5-208ENST00000504489 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 PRR27Q6MZM9 219 aa8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 OCC1Q8TAD7 63 aa8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 KLK5Q9Y337 293 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-208ENST00000504489 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 GAGE12BA1L429 117 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 PGPEP1LA6NFU8 196 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 C9JQL5 133 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 M0R036 132 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 M0R2P5 195 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 GAGE7O76087 117 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 CXCL1P09341 107 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 ASIPP42127 132 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 CEBPGP53567 150 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 SRSF3P84103 164 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 RASL10AQ92737 203 aa8.42□□□□□ -1.06
PDLIM5-208ENST00000504489 LY96Q9Y6Y9 160 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms