RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TMEM263Q8WUH6 116 aaKnown RBP6.26□□□□□ -1.41
DHFR-202ENST00000504396 C17orf77Q96MU5 243 aa6.26□□□□□ -1.41
DHFR-202ENST00000504396 EIF5A2Q9GZV4 153 aaKnown RBP6.26□□□□□ -1.41
DHFR-202ENST00000504396 TMEM242Q9NWH2 141 aa6.26□□□□□ -1.41
DHFR-202ENST00000504396 SNURFLB1AK76 121 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 H3BRN7 92 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 SRP19P09132 144 aaKnown RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 RAB4AP20338 218 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 FGF7P21781 194 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 CDKN1BP46527 198 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 NDUFA6P56556 154 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 ERVFC1-1P60608 527 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 ELOBQ15370 118 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 ESRGQ1W209 222 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 KHDC3LQ587J8 217 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 COA6Q5JTJ3 125 aaKnown RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 DPPA3Q6W0C5 159 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 OR10D4PQ8NGN7 298 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 RNASE8Q8TDE3 154 aaKnown RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 TVP23CQ96ET8 276 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 MRPS16Q9Y3D3 137 aaKnown RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 A0A087X0K7 114 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 H7BYZ3 331 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 J3KRW8 73 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 IFNA5P01569 189 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 OR5G3P0C626 314 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 SELENOTP62341 195 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 PNRC1Q12796 327 aaPredicted RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 ZNF674Q2M3X9 581 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 LINC00612Q8N6U2 182 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 SHANK2-AS3Q9BTD1 123 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 ACTR3CQ9C0K3 210 aaPredicted RBP6.25□□□□□ -1.41
DHFR-202ENST00000504396 WFDC1Q9HC57 220 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 HIGD1AQ9Y241 93 aa6.25□□□□□ -1.41
DHFR-202ENST00000504396 TRBV24-1A0A075B6N3 115 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 RBFOX3A6NFN3 312 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 H3BP45 60 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 H3BQ15 152 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 SYNGR2O43760 224 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 MBPP02686 304 aaPredicted RBP6.24□□□□□ -1.41
DHFR-202ENST00000504396 PLP1P60201 277 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 FHL2Q14192 279 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 ZNF266Q14584 549 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 PSG3Q16557 428 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 SPANXN5Q5MJ07 72 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 TMEM182Q6ZP80 229 aaPredicted RBP6.24□□□□□ -1.41
DHFR-202ENST00000504396 LYPD1Q8N2G4 141 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 RPUSD4Q96CM3 377 aaKnown RBP6.24□□□□□ -1.41
DHFR-202ENST00000504396 SLC25A31Q9H0C2 315 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 C11orf1Q9H5F2 150 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 GSKIPQ9P0R6 139 aa6.24□□□□□ -1.41
DHFR-202ENST00000504396 TRGV2A0A075B6R0 118 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 TRAV1-1A0A0B4J248 108 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 PHOX2AO14813 284 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 SIVA1O15304 175 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 HYPMO75409 117 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
DHFR-202ENST00000504396 CXCL1P09341 107 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 LINC00869P0C866 280 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 TAGLN2P37802 199 aaKnown RBP6.23□□□□□ -1.41
DHFR-202ENST00000504396 NHLH2Q02577 135 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 CYP2G1PQ6ZSU1 146 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 C18orf15Q96N68 181 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 SLC50A1Q9BRV3 221 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 PARD6GQ9BYG4 376 aaPredicted RBP6.23□□□□□ -1.41
DHFR-202ENST00000504396 CTDSP1Q9GZU7 261 aa6.23□□□□□ -1.41
DHFR-202ENST00000504396 LSM5Q9Y4Y9 91 aaKnown RBP6.23□□□□□ -1.41
DHFR-202ENST00000504396 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
DHFR-202ENST00000504396 TCAPO15273 167 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 GCGP01275 180 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
DHFR-202ENST00000504396 LCN15Q6UWW0 184 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 TMEM183AQ8IXX5 376 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 FAM213BQ8TBF2 198 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 PACRGQ96M98 296 aaPredicted RBP6.22□□□□□ -1.41
DHFR-202ENST00000504396 HIST1H2BLQ99880 126 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 SMIM3Q9BZL3 60 aa6.22□□□□□ -1.41
DHFR-202ENST00000504396 FNDC10F2Z333 226 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 NXPH4O95158 308 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 TRGC1P0CF51 173 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 DNAH10OSP0CZ25 163 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 XGP55808 180 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 AKR1C8PQ5T2L2 129 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 GFI1BQ5VTD9 330 aa6.21□□□□□ -1.42
DHFR-202ENST00000504396 Q6ZTI0 123 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms