RNA–Protein interactions for RNA: ENST00000504355.5

PDLIM3-205, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-205ENST00000504355 TAAR5O14804 337 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 SFTA3P0C7M3 94 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 CRYBA4P53673 196 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 FHL2Q14192 279 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 TDRG1Q3Y452 100 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 PSG8Q9UQ74 426 aa11.34□□□□□ -0.59
PDLIM3-205ENST00000504355 CTXND1A0A1B0GTU2 59 aa11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 FLI1Q01543 452 aaPredicted RBP11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 MRPL23Q16540 153 aaKnown RBP11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 PRNTQ86SH4 94 aa11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 PCNPQ8WW12 178 aaKnown RBP11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 RASL10AQ92737 203 aa11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 ZNF479Q96JC4 524 aa11.33□□□□□ -0.6
PDLIM3-205ENST00000504355 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 M0R2P5 195 aa11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 IFNA7P01567 189 aa11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 TYMSP04818 313 aa11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
PDLIM3-205ENST00000504355 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 GCGP01275 180 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 UBE2G2P60604 165 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 TNP2Q05952 138 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 SMUG1Q53HV7 270 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 SAPCD1Q5SSQ6 148 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 TMEM75Q8N9X5 138 aa11.31□□□□□ -0.6
PDLIM3-205ENST00000504355 PKD1P98161 4303 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 TRAV4A0A0B4J268 109 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 A0A1W2PPQ1 181 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 SMLR1H3BR10 107 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 PPT1P50897 306 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 NEGR1Q7Z3B1 354 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 DNAH11Q96DT5 4516 aa11.3□□□□□ -0.6
PDLIM3-205ENST00000504355 C9JCJ5 164 aa11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 G3V3Q6 166 aa11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 SIVA1O15304 175 aa11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 ORM1P02763 201 aa11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 PFN1P07737 140 aaKnown RBP11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 SRIP30626 198 aa11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
PDLIM3-205ENST00000504355 ABCA13Q86UQ4 5058 aa11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 NXPH4O95158 308 aa11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 GYPEP15421 78 aa11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 LYPD5Q6UWN5 251 aa11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 LINC00479Q96M42 142 aa11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 KRTAP1-5Q9BYS1 174 aa11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
PDLIM3-205ENST00000504355 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 MAP1LC3B2A6NCE7 125 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 K7EQD1 137 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 STOML3Q8TAV4 291 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 MAP1LC3BQ9GZQ8 125 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 CYTL1Q9NRR1 136 aa11.27□□□□□ -0.61
PDLIM3-205ENST00000504355 FAM74A7A6NL05 159 aa11.26□□□□□ -0.61
PDLIM3-205ENST00000504355 PEX7O00628 323 aa11.26□□□□□ -0.61
PDLIM3-205ENST00000504355 TXNDC17Q9BRA2 123 aa11.26□□□□□ -0.61
PDLIM3-205ENST00000504355 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
PDLIM3-205ENST00000504355 ARL2-SNX15V9GYD0 113 aa11.26□□□□□ -0.61
PDLIM3-205ENST00000504355 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
PDLIM3-205ENST00000504355 KCNRGQ8N5I3 272 aa11.25□□□□□ -0.61
PDLIM3-205ENST00000504355 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
PDLIM3-205ENST00000504355 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 S100A4P26447 101 aaKnown RBP11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 UBE2G1P62253 170 aa11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 ZNF345Q14585 488 aa11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 CST9LP1Q5W188 147 aa11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 NHLRC2Q8NBF2 726 aa11.24□□□□□ -0.61
PDLIM3-205ENST00000504355 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 A0A0D9SG52 128 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 KANTRA0A1W2PQU2 76 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 C9orf85Q96MD7 179 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 ZNF471Q9BX82 626 aaPredicted RBP11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 LY96Q9Y6Y9 160 aa11.23□□□□□ -0.61
PDLIM3-205ENST00000504355 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 LOC100131303A0A0U1RQF7 123 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 HMSDA8MTL9 139 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 CIDEAO60543 219 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 GATA1P15976 413 aaPredicted RBP11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 FHITP49789 147 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 LINC00315P59091 139 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 SH2D6Q7Z4S9 175 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 Q86TA4 180 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 FAM213BQ8TBF2 198 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
PDLIM3-205ENST00000504355 RS1O15537 224 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms